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tbx3 T-box 3 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 613116, updated on 30-Sep-2021

Summary

Official Symbol
tbx3provided by Xenbase
Official Full Name
T-box 3provided by Xenbase
Primary source
Xenbase:XB-GENE-1018231
See related
EnsemblRapid:ENSXETG00000006579
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
et; ums; xhl; xtbx3; Xltbx3; tbx3-a; tbx3-b; tbx3-iso
Orthologs
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Genomic context

See tbx3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (145775241..145785672)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (133313766..133324195)

Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene mediator complex subunit 13-like Neighboring gene MGC75582, possible similarity to act2 Neighboring gene uncharacterized LOC116406820 Neighboring gene uncharacterized LOC116408328 Neighboring gene uncharacterized LOC108645063 Neighboring gene T-box 5

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
T-box transcription factor TBX3
Names
T-box 3 (ulnar mammary syndrome)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001032353.1NP_001027524.1  T-box transcription factor TBX3

    See identical proteins and their annotated locations for NP_001027524.1

    Status: PROVISIONAL

    Source sequence(s)
    BC099621
    UniProtKB/TrEMBL
    Q4KKX3
    Related
    ENSXETP00000014399.4, ENSXETT00000014399.5
    Conserved Domains (2) summary
    pfam00907
    Location:106286
    T-box
    pfam12598
    Location:304384
    TBX; T-box transcription factor

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    145775241..145785672
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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