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Golga7 golgi autoantigen, golgin subfamily a, 7 [ Mus musculus (house mouse) ]

Gene ID: 57437, updated on 6-May-2021

Summary

Official Symbol
Golga7provided by MGI
Official Full Name
golgi autoantigen, golgin subfamily a, 7provided by MGI
Primary source
MGI:MGI:1931029
See related
Ensembl:ENSMUSG00000015341
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
GCP1; GOLG; GCP16; HSPC0; R75586; HSPC041; AB041568; GOLGA3AP1; C130038N16Rik
Expression
Ubiquitous expression in CNS E14 (RPKM 35.4), limb E14.5 (RPKM 33.1) and 28 other tissues See more
Orthologs
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Genomic context

See Golga7 in Genome Data Viewer
Location:
8; 8 A2
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (23731342..23747096, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (23241326..23258903, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (24351798..24367552, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 30247 Neighboring gene glycerol-3-phosphate acyltransferase 4 Neighboring gene GINS complex subunit 4 (Sld5 homolog) Neighboring gene predicted gene, 39141 Neighboring gene uncharacterized LOC118567553 Neighboring gene predicted gene, 24335

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (2) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC30271, MGC102434, MGC118465

Gene Ontology Provided by MGI

Function Evidence Code Pubs
contributes_to protein-cysteine S-palmitoyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in Golgi to plasma membrane protein transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in Golgi to plasma membrane protein transport ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within Golgi to plasma membrane transport ISO
Inferred from Sequence Orthology
more info
 
involved_in peptidyl-L-cysteine S-palmitoylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in peptidyl-L-cysteine S-palmitoylation ISO
Inferred from Sequence Orthology
more info
 
involved_in protein stabilization ISO
Inferred from Sequence Orthology
more info
 
involved_in protein targeting to membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
located_in Golgi membrane ISO
Inferred from Sequence Orthology
more info
 
is_active_in Golgi stack IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in Golgi stack ISO
Inferred from Sequence Orthology
more info
 
located_in intrinsic component of Golgi membrane ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
part_of palmitoyltransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of palmitoyltransferase complex ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
golgin subfamily A member 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001042484.1NP_001035949.1  golgin subfamily A member 7

    See identical proteins and their annotated locations for NP_001035949.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    AC126038, AK150696, BY330336
    Consensus CDS
    CCDS40297.1
    UniProtKB/Swiss-Prot
    Q91W53
    Related
    ENSMUSP00000062983.7, ENSMUST00000051094.9
    Conserved Domains (1) summary
    pfam10256
    Location:12124
    Erf4; Golgin subfamily A member 7/ERF4 family
  2. NM_020585.2NP_065610.2  golgin subfamily A member 7

    See identical proteins and their annotated locations for NP_065610.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    AC126038, AK150696, BY330336
    Consensus CDS
    CCDS40297.1
    UniProtKB/Swiss-Prot
    Q91W53
    Related
    ENSMUSP00000112935.2, ENSMUST00000121783.7
    Conserved Domains (1) summary
    pfam10256
    Location:12124
    Erf4; Golgin subfamily A member 7/ERF4 family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    23731342..23747096 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006509179.5XP_006509242.1  golgin subfamily A member 7 isoform X1

    See identical proteins and their annotated locations for XP_006509242.1

    Conserved Domains (1) summary
    pfam10256
    Location:12123
    Erf4; Golgin subfamily A member 7/ERF4 family
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