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naif1 nuclear apoptosis inducing factor 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 549107, updated on 30-Sep-2021

Summary

Official Symbol
naif1provided by Xenbase
Official Full Name
nuclear apoptosis inducing factor 1provided by Xenbase
Primary source
Xenbase:XB-GENE-986890
See related
EnsemblRapid:ENSXETG00000007730
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

See naif1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (24030116..24039156, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (2875821..2884862)

Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene proteolipid protein 2 Neighboring gene G-patch domain and KOW motifs Neighboring gene solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 25 Neighboring gene collagen, type XXVII, alpha 1 Neighboring gene microRNA mir-455

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
nuclear apoptosis-inducing factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001016353.2NP_001016353.1  nuclear apoptosis-inducing factor 1

    See identical proteins and their annotated locations for NP_001016353.1

    Status: PROVISIONAL

    Source sequence(s)
    CR761320
    UniProtKB/TrEMBL
    Q28GM6
    Related
    ENSXETP00000016858.2, ENSXETT00000016858.4
    Conserved Domains (1) summary
    pfam13873
    Location:885
    Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    24030116..24039156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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