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PDXK pyridoxal kinase [ Bos taurus (cattle) ]

Gene ID: 514168, updated on 21-Jun-2021

Summary

Official Symbol
PDXKprovided by VGNC
Official Full Name
pyridoxal kinaseprovided by VGNC
Primary source
VGNC:VGNC:50243
See related
BGD:BT29797; Ensembl:ENSBTAG00000018186
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See PDXK in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 1 NC_037328.1 (143782398..143813208)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 1 AC_000158.1 (146490839..146516811)

Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene heat shock transcription factor 2 binding protein Neighboring gene ribosomal RNA processing 1B Neighboring gene cystatin B (stefin B) Neighboring gene cystatin B (stefin B)

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Homology

Clone Names

  • MGC152058

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables lithium ion binding IEA
Inferred from Electronic Annotation
more info
 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 
enables potassium ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 
enables sodium ion binding IEA
Inferred from Electronic Annotation
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
pyridoxal kinase
Names
pyridoxal (pyridoxine, vitamin B6) kinase
pyridoxine kinase
NP_001069119.1
XP_024840164.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075651.2NP_001069119.1  pyridoxal kinase

    See identical proteins and their annotated locations for NP_001069119.1

    Status: PROVISIONAL

    Source sequence(s)
    BC122793
    UniProtKB/Swiss-Prot
    Q0II59
    Related
    ENSBTAP00000024203.5, ENSBTAT00000024203.6
    Conserved Domains (1) summary
    cl00192
    Location:6304
    ribokinase_pfkB_like; ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, ...

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037328.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    143782398..143813208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024984396.1XP_024840164.1  pyridoxal kinase isoform X1

    Conserved Domains (1) summary
    cl00192
    Location:30304
    ribokinase_pfkB_like; ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, ...
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