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RRP1 ribosomal RNA processing 1 [ Bos taurus (cattle) ]

Gene ID: 512925, updated on 2-Jul-2020

Summary

Official Symbol
RRP1provided by VGNC
Official Full Name
ribosomal RNA processing 1provided by VGNC
Primary source
VGNC:VGNC:34168
See related
BGD:BT20781; Ensembl:ENSBTAG00000003981
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
D21S2056E
Orthologs
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Genomic context

See RRP1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 1 NC_037328.1 (143850737..143874776)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 1 AC_000158.1 (146559177..146583249)

Chromosome 1 - NC_037328.1Genomic Context describing neighboring genes Neighboring gene cystatin B (stefin B) Neighboring gene cystatin B (stefin B) Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 3 Neighboring gene trafficking protein particle complex subunit 10

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
ribosomal RNA processing protein 1 homolog A
Names
nucleolar protein NOP52
ribosomal RNA processing 1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075589.1NP_001069057.1  ribosomal RNA processing protein 1 homolog A

    See identical proteins and their annotated locations for NP_001069057.1

    Status: PROVISIONAL

    Source sequence(s)
    BC118310
    UniProtKB/TrEMBL
    Q148H9
    Related
    ENSBTAP00000040952.1, ENSBTAT00000043376.2
    Conserved Domains (1) summary
    pfam05997
    Location:11219
    Nop52; Nucleolar protein,Nop52

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037328.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    143850737..143874776
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024983275.1XP_024839043.1  ribosomal RNA processing protein 1 homolog A isoform X2

    Conserved Domains (1) summary
    pfam05997
    Location:17189
    Nop52; Nucleolar protein,Nop52
  2. XM_024983344.1XP_024839112.1  ribosomal RNA processing protein 1 homolog A isoform X3

    Conserved Domains (1) summary
    pfam05997
    Location:26152
    Nop52; Nucleolar protein,Nop52
  3. XM_024983239.1XP_024839007.1  ribosomal RNA processing protein 1 homolog A isoform X1

    Conserved Domains (1) summary
    pfam05997
    Location:11219
    Nop52; Nucleolar protein,Nop52
  4. XM_024983308.1XP_024839076.1  ribosomal RNA processing protein 1 homolog A isoform X3

    Conserved Domains (1) summary
    pfam05997
    Location:26152
    Nop52; Nucleolar protein,Nop52
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