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CCN1 cellular communication network factor 1 [ Bos taurus (cattle) ]

Gene ID: 508941, updated on 2-Jul-2020

Summary

Official Symbol
CCN1provided by VGNC
Official Full Name
cellular communication network factor 1provided by VGNC
Primary source
VGNC:VGNC:50270
See related
BGD:BT15906; Ensembl:ENSBTAG00000009844
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
GIG1; CYR61
Orthologs
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Genomic context

See CCN1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 3 NC_037330.1 (58488393..58491302, complement)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 3 AC_000160.1 (58678777..58681686, complement)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene zinc finger HIT-type containing 6 Neighboring gene uncharacterized LOC101904498 Neighboring gene uncharacterized LOC112446002 Neighboring gene uncharacterized LOC101904769 Neighboring gene DDB1- and CUL4-associated factor 16-like Neighboring gene dimethylarginine dimethylaminohydrolase 1

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Homology

Clone Names

  • MGC128088

General protein information

Preferred Names
CCN family member 1
Names
cysteine rich angiogenic inducer 61
cysteine-rich heparin-binding protein 61

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001034340.2NP_001029512.1  CCN family member 1 precursor

    See identical proteins and their annotated locations for NP_001029512.1

    Status: PROVISIONAL

    Source sequence(s)
    BC102934
    UniProtKB/TrEMBL
    Q3ZC35
    Related
    ENSBTAP00000012977.3, ENSBTAT00000012977.4
    Conserved Domains (4) summary
    smart00209
    Location:233273
    TSP1; Thrombospondin type 1 repeats
    smart00214
    Location:100159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:2678
    IGFBP; Insulin-like growth factor binding protein
    cl21545
    Location:294376
    GHB_like; Glycoprotein hormone beta chain homologues

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    58488393..58491302 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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