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CCN1 cellular communication network factor 1 [ Canis lupus familiaris (dog) ]

Gene ID: 479967, updated on 24-Apr-2021

Summary

Official Symbol
CCN1provided by VGNC
Official Full Name
cellular communication network factor 1provided by VGNC
Primary source
VGNC:VGNC:50294
See related
Ensembl:ENSCAFG00000020276
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
CYR61
Orthologs
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Genomic context

See CCN1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (62984109..62986915, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (65092607..65095413, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (62986500..62989314, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (62514247..62517060, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (62482278..62484463, complement)
105 previous assembly CanFam3.1 (GCF_000002285.3) 6 NC_006588.3 (62443285..62446246, complement)

Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene collagen type XXIV alpha 1 chain Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like Neighboring gene zinc finger HIT-type containing 6 Neighboring gene uncharacterized LOC119872282 Neighboring gene dimethylarginine dimethylaminohydrolase 1 Neighboring gene uncharacterized LOC111096420

Genomic regions, transcripts, and products

General gene information

Homology

General protein information

Preferred Names
protein CYR61; CCN family member 1
Names
cysteine rich angiogenic inducer 61

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051810.1 Reference ROS_Cfam_1.0

    Range
    62984109..62986915 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038667747.1XP_038523675.1  CCN family member 1 isoform X2

    Conserved Domains (4) summary
    smart00214
    Location:100159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:2678
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:292374
    GHB_like; Glycoprotein hormone beta chain homologues
  2. XM_038667746.1XP_038523674.1  CCN family member 1 isoform X1

    Conserved Domains (4) summary
    smart00214
    Location:100159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:2678
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:293375
    GHB_like; Glycoprotein hormone beta chain homologues

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049266.1 Alternate UMICH_Zoey_3.1

    Range
    62514247..62517060 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038480452.1XP_038336380.1  CCN family member 1 isoform X2

    Conserved Domains (4) summary
    smart00214
    Location:100159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:2678
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:292374
    GHB_like; Glycoprotein hormone beta chain homologues
  2. XM_038480451.1XP_038336379.1  CCN family member 1 isoform X1

    Conserved Domains (4) summary
    smart00214
    Location:100159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:2678
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:293375
    GHB_like; Glycoprotein hormone beta chain homologues

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

    Range
    62482278..62484463 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038603043.1XP_038458971.1  CCN family member 1 isoform X2

    Conserved Domains (4) summary
    smart00214
    Location:100159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:2678
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:292374
    GHB_like; Glycoprotein hormone beta chain homologues
  2. XM_038603042.1XP_038458970.1  CCN family member 1 isoform X1

    Conserved Domains (4) summary
    smart00214
    Location:100159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:2678
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:293375
    GHB_like; Glycoprotein hormone beta chain homologues

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

    Range
    62986500..62989314 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038538916.1XP_038394844.1  CCN family member 1 isoform X2

    Conserved Domains (4) summary
    smart00214
    Location:100159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:2678
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:292374
    GHB_like; Glycoprotein hormone beta chain homologues
  2. XM_038538915.1XP_038394843.1  CCN family member 1 isoform X1

    Conserved Domains (4) summary
    smart00214
    Location:100159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:2678
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:293375
    GHB_like; Glycoprotein hormone beta chain homologues

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    65092607..65095413 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022420550.2XP_022276258.1  CCN family member 1 isoform X2

    Conserved Domains (4) summary
    smart00214
    Location:100159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:2678
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:292374
    GHB_like; Glycoprotein hormone beta chain homologues
  2. XM_537091.7XP_537091.2  CCN family member 1 isoform X1

    UniProtKB/TrEMBL
    E2RAA0
    Related
    ENSCAFP00000030073.3
    Conserved Domains (4) summary
    smart00214
    Location:100159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:2678
    IGFBP; Insulin-like growth factor binding protein
    pfam19035
    Location:229272
    TSP1_CCN; CCN3 Nov like TSP1 domain
    cl21545
    Location:293375
    GHB_like; Glycoprotein hormone beta chain homologues
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