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ELP3 elongator acetyltransferase complex subunit 3 [ Canis lupus familiaris (dog) ]

Gene ID: 477370, updated on 28-Sep-2021

Summary

Official Symbol
ELP3provided by VGNC
Official Full Name
elongator acetyltransferase complex subunit 3provided by VGNC
Primary source
VGNC:VGNC:40328
See related
EnsemblRapid:ENSCAFG00845008841
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

See ELP3 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
15
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 25 NC_051829.1 (29607769..29699772, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 25 NC_006607.4 (30065152..30157019, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 25 NC_049246.1 (29584694..29676660, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 25 NC_049285.1 (29533972..29625916, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 25 NC_049766.1 (29418481..29510434, complement)
105 previous assembly CanFam3.1 (GCF_000002285.3) 25 NC_006607.3 (29415229..29507159, complement)

Chromosome 25 - NC_051829.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119865846 Neighboring gene uncharacterized LOC111092477 Neighboring gene uncharacterized LOC119865940 Neighboring gene nuclear GTPase, germinal center associated Neighboring gene uncharacterized LOC111092286 Neighboring gene scavenger receptor class A member 5

Genomic regions, transcripts, and products

General gene information

Homology

  • Homologs of the ELP3 gene: The ELP3 gene is conserved in human, chimpanzee, Rhesus monkey, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs from Annotation Pipeline: 406 organisms have orthologs with human gene ELP3
  • Orthologs

General protein information

Preferred Names
elongator complex protein 3
Names
elongation protein 3 homolog
XP_022265816.1
XP_038291258.1
XP_038291259.1
XP_038366203.1
XP_038366204.1
XP_038429659.1
XP_038429660.1
XP_038493967.1
XP_038493968.1
XP_534563.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051829.1 Reference ROS_Cfam_1.0

    Range
    29607769..29699772 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038435330.1XP_038291258.1  elongator complex protein 3 isoform X1

    Conserved Domains (1) summary
    TIGR01211
    Location:36547
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family
  2. XM_038435331.1XP_038291259.1  elongator complex protein 3 isoform X2

    Related
    ENSCAFP00845012227.1, ENSCAFT00845015718.1
    Conserved Domains (1) summary
    TIGR01211
    Location:36546
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049285.1 Alternate UMICH_Zoey_3.1

    Range
    29533972..29625916 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038510276.1XP_038366204.1  elongator complex protein 3 isoform X2

    Conserved Domains (1) summary
    TIGR01211
    Location:36546
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family
  2. XM_038510275.1XP_038366203.1  elongator complex protein 3 isoform X1

    Conserved Domains (1) summary
    TIGR01211
    Location:36547
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049766.1 Alternate UNSW_CanFamBas_1.0

    Range
    29418481..29510434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038638040.1XP_038493968.1  elongator complex protein 3 isoform X2

    Conserved Domains (1) summary
    TIGR01211
    Location:36546
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family
  2. XM_038638039.1XP_038493967.1  elongator complex protein 3 isoform X1

    Conserved Domains (1) summary
    TIGR01211
    Location:36547
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049246.1 Alternate UU_Cfam_GSD_1.0

    Range
    29584694..29676660 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038573732.1XP_038429660.1  elongator complex protein 3 isoform X2

    Conserved Domains (1) summary
    TIGR01211
    Location:36546
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family
  2. XM_038573731.1XP_038429659.1  elongator complex protein 3 isoform X1

    Conserved Domains (1) summary
    TIGR01211
    Location:36547
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006607.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    30065152..30157019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_534563.7XP_534563.3  elongator complex protein 3 isoform X2

    UniProtKB/TrEMBL
    F1PAW4
    Conserved Domains (1) summary
    TIGR01211
    Location:36546
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family
  2. XM_022410108.2XP_022265816.1  elongator complex protein 3 isoform X1

    Conserved Domains (1) summary
    TIGR01211
    Location:36547
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family
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