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ELP3 elongator acetyltransferase complex subunit 3 [ Gallus gallus (chicken) ]

Gene ID: 422021, updated on 23-Sep-2021

Summary

Symbol
ELP3provided by CGNC
Full Name
elongator acetyltransferase complex subunit 3provided by CGNC
Primary source
CGNC:12458
See related
Ensembl:ENSGALG00000016624
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
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Genomic context

See ELP3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
105 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (105509624..105592974, complement)
105 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.1) 3 NC_052575.1 (105273277..105356627, complement)
104 previous assembly GRCg6a (GCF_000002315.5) 3 NC_006090.5 (105709011..105792874, complement)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 3 NC_006090.4 (106164712..106248576, complement)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 35-like Neighboring gene uncharacterized LOC121110418 Neighboring gene F-box protein 16 Neighboring gene frizzled class receptor 3

Genomic regions, transcripts, and products

General gene information

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
enables N-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables phosphorylase kinase regulator activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 
enables tRNA uridine(34) acetyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in central nervous system development IEA
Inferred from Electronic Annotation
more info
 
involved_in neuron migration IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of catalytic activity IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of transcription by RNA polymerase II ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in tRNA wobble uridine modification ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 
part_of elongator holoenzyme complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
elongator complex protein 3
Names
elongation protein 3 homolog
tRNA uridine(34) acetyltransferase
NP_001034382.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039293.2NP_001034382.1  elongator complex protein 3

    See identical proteins and their annotated locations for NP_001034382.1

    Status: PROVISIONAL

    Source sequence(s)
    JAENSK010000070
    UniProtKB/Swiss-Prot
    Q5ZHS1
    Related
    ENSGALP00000026781.6, ENSGALT00000026832.6
    Conserved Domains (1) summary
    TIGR01211
    Location:36545
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    105509624..105592974 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    105273277..105356627 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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