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tmprss2.3.L transmembrane serine protease 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 397830, updated on 9-Oct-2021

Summary

Official Symbol
tmprss2.3.L
Official Full Name
transmembrane serine protease 2 L homeolog
Primary source
Xenbase:XB-GENE-5798775
Locus tag
XELAEV_1801140210mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
pp9284; prss10; xesp-2; tmprss2; tmprss2.L
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Genomic context

See tmprss2.3.L in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
23
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (9612489..9677692)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (9378622..9443700)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene transmembrane serine protease 2 gene 1 L homeolog Neighboring gene transmembrane serine protease 2 gene 2 L homeolog Neighboring gene transmembrane serine protease 2 gene 4 L homeolog Neighboring gene transmembrane protease serine 2-like

Genomic regions, transcripts, and products

General protein information

Preferred Names
transmembrane serine protease 2 L homeolog
Names
embryonic serine protease-2
transmembrane protease, serine 2 L homeolog
NP_001081427.1
NP_001090208.1
XP_041436834.1
XP_041436835.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001087958.1NP_001081427.1  transmembrane serine protease 2 L homeolog isoform 1

    See identical proteins and their annotated locations for NP_001081427.1

    Status: PROVISIONAL

    Source sequence(s)
    AB038497
    UniProtKB/TrEMBL
    Q9DGR2
    Conserved Domains (4) summary
    smart00020
    Location:530759
    Tryp_SPc; Trypsin-like serine protease
    cd00112
    Location:96125
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00190
    Location:531762
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    cl02509
    Location:430523
    SRCR_2; Scavenger receptor cysteine-rich domain
  2. NM_001096739.1NP_001090208.1  transmembrane serine protease 2 L homeolog isoform 2

    See identical proteins and their annotated locations for NP_001090208.1

    Status: PROVISIONAL

    Source sequence(s)
    BC068636
    UniProtKB/TrEMBL
    Q6NUF5
    Conserved Domains (4) summary
    smart00020
    Location:485714
    Tryp_SPc; Trypsin-like serine protease
    cd00112
    Location:96125
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00190
    Location:486717
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    cl02509
    Location:383478
    SRCR_2; Scavenger receptor cysteine-rich domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    9612489..9677692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041580901.1XP_041436835.1  transmembrane serine protease 2 L homeolog isoform X2

    Conserved Domains (2) summary
    cd00112
    Location:352381
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00190
    Location:489717
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
  2. XM_041580900.1XP_041436834.1  transmembrane serine protease 2 L homeolog isoform X1

    Conserved Domains (2) summary
    cd00112
    Location:394423
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00190
    Location:531759
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
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