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Ms4a8 membrane spanning 4-domains A8 [ Rattus norvegicus (Norway rat) ]

Gene ID: 361733, updated on 30-Sep-2021

Summary

Official Symbol
Ms4a8provided by RGD
Official Full Name
membrane spanning 4-domains A8provided by RGD
Primary source
RGD:1309035
See related
EnsemblRapid:ENSRNOG00000020939
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Ms4a8a; Ms4a8b
Expression
Biased expression in Uterus (RPKM 8.9), Lung (RPKM 4.4) and 5 other tissues See more
Orthologs
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Genomic context

See Ms4a8 in Genome Data Viewer
Location:
1q43
Exon count:
7
Annotation release Status Assembly Chr Location
108 current mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (207730665..207744260, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (227136154..227149748, complement)

Chromosome 1 - NC_051336.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100910973 Neighboring gene similar to Sorting nexin-5 Neighboring gene uncharacterized LOC102557108 Neighboring gene membrane-spanning 4-domains subfamily A member 12-like

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Markers

Homology

Gene Ontology Provided by RGD

Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
membrane-spanning 4-domains subfamily A member 8
Names
membrane-spanning 4-domains, subfamily A, member 8
membrane-spanning 4-domains, subfamily A, member 8A
membrane-spanning 4-domains, subfamily A, member 8B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001108519.1NP_001101989.1  membrane-spanning 4-domains subfamily A member 8

    See identical proteins and their annotated locations for NP_001101989.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473953
    UniProtKB/TrEMBL
    D3ZDZ2
    Related
    ENSRNOP00000062507.2, ENSRNOT00000063879.2
    Conserved Domains (1) summary
    pfam04103
    Location:71208
    CD20; CD20-like family

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051336.1 Reference mRatBN7.2 Primary Assembly

    Range
    207730665..207744260 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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