Format

Send to:

Choose Destination

VhaAC39-1 Vacuolar H[+] ATPase AC39 subunit 1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31342, updated on 26-Aug-2021

Summary

Official Symbol
VhaAC39-1provided by FlyBase
Official Full Name
Vacuolar H[+] ATPase AC39 subunit 1provided by FlyBase
Primary source
FLYBASE:FBgn0285910
Locus tag
Dmel_CG2934
Gene type
protein coding
RNA name
vacuolar H[+] ATPase AC39 subunit 1
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
anon-EST:GressD5; ATP6V0D1; CG2934; cho; Dmel\CG2934; V0d; vhaAC39; Vhaac39; VhaAC39; vhaAC39-1
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See VhaAC39-1 in Genome Data Viewer
Location:
3F4-3F4; 1-5 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.32 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (3880748..3882967)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (3774781..3777000)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene echinus Neighboring gene long non-coding RNA on the X 1 Neighboring gene yin Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the VhaAC39-1 gene: The VhaAC39-1 gene is conserved in human, chimpanzee, dog, cow, mouse, rat, chicken, zebrafish, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in cellular iron ion homeostasis ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in cellular response to increased oxygen levels ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in proton transmembrane transport IC
Inferred by Curator
more info
PubMed 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in terminal branching, open tracheal system IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in vacuolar acidification IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in vacuolar acidification IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in vacuolar transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
vacuolar H[+] ATPase AC39 subunit 1
Names
CG2934-PA
V-ATPase V0 d subunit
VhaAC39
VhaAC39-1-PA
chocolate
vacuolar ATPsintase subunit 1
vacuolar H[+] ATPase subunit AC39-1
vacuolar H[+]-ATPase C39 subunit
NP_570080.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    3880748..3882967
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_130724.4NP_570080.1  vacuolar H[+] ATPase AC39 subunit 1 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_570080.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9W4P5
    Related
    FBpp0070584, FBtr0070611
    Conserved Domains (1) summary
    pfam01992
    Location:15343
    vATP-synt_AC39; ATP synthase (C/AC39) subunit
Support Center