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Pramel22 PRAME like 22 [ Mus musculus (house mouse) ]

Gene ID: 277668, updated on 8-Jul-2021

Summary

Official Symbol
Pramel22provided by MGI
Official Full Name
PRAME like 22provided by MGI
Primary source
MGI:MGI:3649971
See related
Ensembl:ENSMUSG00000078513
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm13088
Expression
Low expression observed in reference dataset See more
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Genomic context

See Pramel22 in Genome Data Viewer
Location:
4; 4 E1
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (143380330..143387168, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (143653760..143660598, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (143243663..143247149, complement)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene 13058 Neighboring gene PRAME like 21 Neighboring gene RAB6, member RAS oncogene family pseudogene Neighboring gene PRAME like 23

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ubiquitin ligase-substrate adaptor activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
part_of Cul2-RING ubiquitin ligase complex ISO
Inferred from Sequence Orthology
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
PRAME like 22; uncharacterized protein LOC277668

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001126325.1NP_001119797.1  PRAME like 22

    Status: PROVISIONAL

    Source sequence(s)
    AL713865
    Consensus CDS
    CCDS51356.1
    UniProtKB/TrEMBL
    A2AGW6
    Related
    ENSMUSP00000101397.2, ENSMUST00000105771.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    143380330..143387168 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011250278.1XP_011248580.1  uncharacterized protein LOC277668 isoform X1

  2. XM_030253595.1XP_030109455.1  uncharacterized protein LOC277668 isoform X2

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