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elp3 putative elongator complex histone acetyltransferase subunit Elp3 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541614, updated on 6-May-2021

Summary

Gene symbol
elp3
Gene description
putative elongator complex histone acetyltransferase subunit Elp3
Primary source
PomBase:SPAC29A4.20
Locus tag
SPAC29A4.20
Gene type
protein coding
RNA name
putative elongator complex histone acetyltransferase subunit Elp3
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
kat9
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Genomic context

See elp3 in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (5104252..5106372, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene putative ubiquitin conjugating enzyme Ubc14 Neighboring gene putative TFIIIC subunit Sfc7 Neighboring gene protein mug95 Neighboring gene ATP-dependent DNA helicase Snf21 Neighboring gene miscRNA Neighboring gene Ca(2+)/Mn(2+)-transporting P-type ATPase P5 type Cta5 Neighboring gene Clr6 histone deacetylase complex subunit Prw1 Neighboring gene mitocondrial FUN14 family protein Neighboring gene halotolerence protein 4

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the elp3 gene: The elp3 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, M.oryzae, N.crassa, A.thaliana, rice, and frog.

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
enables N-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 
enables tRNA uridine(34) acetyltransferase activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm HDA PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in cytosol HDA PubMed 
part_of elongator holoenzyme complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of elongator holoenzyme complex ISO
Inferred from Sequence Orthology
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
putative elongator complex histone acetyltransferase subunit Elp3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    5104252..5106372 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001020291.2NP_594862.1  putative elongator complex histone acetyltransferase subunit Elp3 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594862.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O14023
    Conserved Domains (1) summary
    COG1243
    Location:14544
    ELP3; Histone acetyltransferase, component of the RNA polymerase elongator complex [Transcription, Chromatin structure and dynamics]
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