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SPAC24C9.06c putative aconitate hydratase [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541450, updated on 6-May-2021

Summary

Gene symbol
SPAC24C9.06c
Gene description
putative aconitate hydratase
Primary source
PomBase:SPAC24C9.06c
Locus tag
SPAC24C9.06c
Gene type
protein coding
RNA name
putative aconitate hydratase
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

See SPAC24C9.06c in Genome Data Viewer
Location:
chromosome: I
Exon count:
2
Sequence:
Chromosome: I; NC_003424.3 (3048060..3051537, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene protein mug70 Neighboring gene tRNA Neighboring gene miscRNA Neighboring gene 1,3-beta-glucan synthase subunit Bgs2 Neighboring gene miscRNA

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the SPAC24C9.06c gene: The SPAC24C9.06c gene is conserved in human, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, M.oryzae, N.crassa, and frog.

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
enables aconitate hydratase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables aconitate hydratase activity ISO
Inferred from Sequence Orthology
more info
 
enables citrate dehydratase activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in glutamate metabolic process NAS
Non-traceable Author Statement
more info
 
involved_in tricarboxylic acid cycle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in tricarboxylic acid cycle ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in mitochondrial matrix ISO
Inferred from Sequence Orthology
more info
 
is_active_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
putative aconitate hydratase
NP_594031.2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    3048060..3051537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019456.2NP_594031.2  putative aconitate hydratase [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_594031.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O13966
    Conserved Domains (3) summary
    cd01584
    Location:102512
    AcnA_Mitochondrial; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle
    cd01578
    Location:593741
    AcnA_Mitochon_Swivel; Mitochondrial aconitase A swivel domain. Aconitase (also known as aconitate hydratase and citrate hydro-lyase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. This is the aconitase swivel domain, which undergoes ...
    TIGR01340
    Location:52782
    aconitase_mito; aconitate hydratase, mitochondrial
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