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Proser2 proline and serine rich 2 [ Mus musculus (house mouse) ]

Gene ID: 227545, updated on 23-Jun-2021

Summary

Official Symbol
Proser2provided by MGI
Official Full Name
proline and serine rich 2provided by MGI
Primary source
MGI:MGI:2442238
See related
Ensembl:ENSMUSG00000045319
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AU067770; 5430407P10Rik
Expression
Broad expression in stomach adult (RPKM 13.4), liver adult (RPKM 5.9) and 20 other tissues See more
Orthologs
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Genomic context

See Proser2 in Genome Data Viewer
Location:
2; 2 A1
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (6103304..6135100, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (6098493..6130291, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (6019546..6051231, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene UPF2 regulator of nonsense transcripts homolog (yeast) Neighboring gene predicted gene, 30136 Neighboring gene TRAF-interacting protein pseudogene Neighboring gene predicted gene 10857 Neighboring gene RIKEN cDNA A230108P19 gene Neighboring gene enoyl Coenzyme A hydratase domain containing 3 Neighboring gene predicted gene, 54100

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Markers

Homology

Clone Names

  • MGC36947

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
proline and serine-rich protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001159657.1NP_001153129.1  proline and serine-rich protein 2

    See identical proteins and their annotated locations for NP_001153129.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Both variants encode the same protein.
    Source sequence(s)
    AI317549, AK132370, AL928735, BB569558
    Consensus CDS
    CCDS15671.1
    UniProtKB/Swiss-Prot
    Q8C5R2
    Related
    ENSMUSP00000060780.6, ENSMUST00000054254.12
    Conserved Domains (2) summary
    PHA03247
    Location:97261
    PHA03247; large tegument protein UL36; Provisional
    pfam15385
    Location:439469
    SARG; Specifically androgen-regulated gene protein
  2. NM_144883.4NP_659132.2  proline and serine-rich protein 2

    See identical proteins and their annotated locations for NP_659132.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants encode the same protein.
    Source sequence(s)
    AI317549, AK132370
    Consensus CDS
    CCDS15671.1
    UniProtKB/Swiss-Prot
    Q8C5R2
    Related
    ENSMUSP00000110592.3, ENSMUST00000114942.9
    Conserved Domains (2) summary
    PHA03247
    Location:97261
    PHA03247; large tegument protein UL36; Provisional
    pfam15385
    Location:439469
    SARG; Specifically androgen-regulated gene protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    6103304..6135100 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011238976.4XP_011237278.1  proline and serine-rich protein 2 isoform X1

    See identical proteins and their annotated locations for XP_011237278.1

    UniProtKB/Swiss-Prot
    Q8C5R2
    Conserved Domains (2) summary
    PHA03247
    Location:97261
    PHA03247; large tegument protein UL36; Provisional
    pfam15385
    Location:439469
    SARG; Specifically androgen-regulated gene protein
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