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Sh3bgrl2 SH3 domain binding glutamic acid-rich protein like 2 [ Mus musculus (house mouse) ]

Gene ID: 212531, updated on 23-Jun-2021

Summary

Official Symbol
Sh3bgrl2provided by MGI
Official Full Name
SH3 domain binding glutamic acid-rich protein like 2provided by MGI
Primary source
MGI:MGI:1915350
See related
Ensembl:ENSMUSG00000032261
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AA408038; B930089I21; A930014C21Rik
Expression
Broad expression in colon adult (RPKM 3.6), bladder adult (RPKM 2.8) and 25 other tissues See more
Orthologs
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Genomic context

See Sh3bgrl2 in Genome Data Viewer
Location:
9; 9 E2
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (83430391..83482345)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (83548338..83600292)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (83441945..83493899)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene Leber congenital amaurosis 5 (human) Neighboring gene predicted gene 2087 Neighboring gene ribosomal protein S15A, pseudogene Neighboring gene predicted gene, 39384 Neighboring gene predicted gene, 36120 Neighboring gene predicted gene 2109

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in nuclear membrane ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
SH3 domain-binding glutamic acid-rich-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_172507.5NP_766095.1  SH3 domain-binding glutamic acid-rich-like protein 2

    See identical proteins and their annotated locations for NP_766095.1

    Status: PROVISIONAL

    Source sequence(s)
    AC113158, AC125106
    Consensus CDS
    CCDS40708.1
    UniProtKB/Swiss-Prot
    Q8BG73
    Related
    ENSMUSP00000108841.4, ENSMUST00000113215.10
    Conserved Domains (1) summary
    cd03030
    Location:297
    GRX_SH3BGR; Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    83430391..83482345
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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