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Pramel27 PRAME like 27 [ Mus musculus (house mouse) ]

Gene ID: 194225, updated on 8-Jul-2021

Summary

Official Symbol
Pramel27provided by MGI
Official Full Name
PRAME like 27provided by MGI
Primary source
MGI:MGI:3650203
See related
Ensembl:ENSMUSG00000029451
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm13103; E330017N17
Expression
Low expression observed in reference dataset See more
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Genomic context

See Pramel27 in Genome Data Viewer
Location:
4 E1; 4
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (143573067..143580207)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (143846497..143853637)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 4 NC_000070.5 (143436400..143443540)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene PRAME like 25 Neighboring gene PRAME like 26 Neighboring gene PRAME like 11 Neighboring gene oogenesin 2 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ubiquitin ligase-substrate adaptor activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
part_of Cul2-RING ubiquitin ligase complex ISO
Inferred from Sequence Orthology
more info
 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
PRAME like 27; uncharacterized protein LOC194225

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177571.3NP_808239.2  PRAME like 27

    See identical proteins and their annotated locations for NP_808239.2

    Status: VALIDATED

    Source sequence(s)
    BB555205, BC096438, BY029530, DV662991
    Consensus CDS
    CCDS38949.1
    UniProtKB/TrEMBL
    Q4VAD2
    Related
    ENSMUSP00000092099.2, ENSMUST00000094522.8

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    143573067..143580207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030253367.1XP_030109227.1  uncharacterized protein LOC194225 isoform X1

    Related
    ENSMUSP00000101394.2, ENSMUST00000105768.2
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