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Nmt1 N-myristoyltransferase 1 [ Mus musculus (house mouse) ]

Gene ID: 18107, updated on 6-May-2021

Summary

Official Symbol
Nmt1provided by MGI
Official Full Name
N-myristoyltransferase 1provided by MGI
Primary source
MGI:MGI:102579
See related
Ensembl:ENSMUSG00000020936
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AW536594
Expression
Ubiquitous expression in placenta adult (RPKM 40.2), testis adult (RPKM 33.8) and 28 other tissues See more
Orthologs
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Genomic context

See Nmt1 in Genome Data Viewer
Location:
11; 11 E1
Exon count:
13
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (102919163..102959734)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (103028344..103068912)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (102889876..102927419)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 34620 Neighboring gene dephospho-CoA kinase domain containing Neighboring gene microRNA 6931 Neighboring gene predicted gene, 42090 Neighboring gene phospholipase C, delta 3 Neighboring gene acyl-Coenzyme A binding domain containing 4

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
enables glycylpeptide N-tetradecanoyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables glycylpeptide N-tetradecanoyltransferase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables glycylpeptide N-tetradecanoyltransferase activity ISO
Inferred from Sequence Orthology
more info
PubMed 
enables glycylpeptide N-tetradecanoyltransferase activity TAS
Traceable Author Statement
more info
PubMed 
enables myristoyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm TAS
Traceable Author Statement
more info
PubMed 
located_in cytosol ISO
Inferred from Sequence Orthology
more info
 
located_in extrinsic component of membrane ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
glycylpeptide N-tetradecanoyltransferase 1
Names
NMT 1
myristoyl-CoA:protein N-myristoyltransferase 1
peptide N-myristoyltransferase 1
type I N-myristoyltransferase
NP_032733.1
XP_006532508.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008707.4NP_032733.1  glycylpeptide N-tetradecanoyltransferase 1

    See identical proteins and their annotated locations for NP_032733.1

    Status: VALIDATED

    Source sequence(s)
    AL731805
    Consensus CDS
    CCDS25511.1
    UniProtKB/Swiss-Prot
    O70310
    UniProtKB/TrEMBL
    Q3UJC3
    Related
    ENSMUSP00000021314.8, ENSMUST00000021314.8
    Conserved Domains (1) summary
    COG5092
    Location:86484
    NMT1; N-myristoyl transferase [Lipid metabolism]

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    102919163..102959734
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006532445.5XP_006532508.1  glycylpeptide N-tetradecanoyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_006532508.1

    UniProtKB/Swiss-Prot
    O70310
    UniProtKB/TrEMBL
    Q3UJC3
    Conserved Domains (1) summary
    COG5092
    Location:86484
    NMT1; N-myristoyl transferase [Lipid metabolism]
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