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AgaP_AGAP008300 AGAP008300-PA [ Anopheles gambiae str. PEST ]

Gene ID: 1277684, updated on 20-Sep-2020

Summary

Gene symbol
AgaP_AGAP008300
Gene description
AGAP008300-PA
Primary source
VectorBase:AGAP008300
Locus tag
AgaP_AGAP008300
Gene type
protein coding
RNA name
AGAP008300-RA
RefSeq status
PROVISIONAL
Organism
Anopheles gambiae str. PEST (strain: PEST)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
Old locus tag
AgaP_ENSANGG00000005077; ENSANGG00000005077
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Genomic context

See AgaP_AGAP008300 in Genome Data Viewer
Location:
chromosome: 3R
Exon count:
3
Sequence:
Chromosome: 3R; NT_078268.4 (8742452..8744293, complement)

Chromosome 3R - NT_078268.4Genomic Context describing neighboring genes Neighboring gene AGAP008298-PA Neighboring gene AGAP008299-PA Neighboring gene AGAP008301-PA Neighboring gene AGAP008302-PA

General gene information

Homology

  • Homologs of the AgaP_AGAP008300 gene: The AgaP_AGAP008300 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs

General protein information

Preferred Names
AGAP008300-PA
XP_317165.4
  • AGAP008300-PA encoded by AGAP008300-RA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_078268.4 Reference assembly

    Range
    8742452..8744293 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_317165.4XP_317165.4  AGAP008300-PA [Anopheles gambiae str. PEST]

    See identical proteins and their annotated locations for XP_317165.4

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q7PJ82
    Conserved Domains (3) summary
    cd01335
    Location:98344
    Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
    TIGR01211
    Location:23548
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family
    pfam16199
    Location:316394
    Radical_SAM_C; Radical_SAM C-terminal domain
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