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TMPRSS2 transmembrane serine protease 2 [ Mauremys reevesii (Reeves's turtle) ]

Gene ID: 120395666, updated on 5-Jun-2021

Summary

Gene symbol
TMPRSS2
Gene description
transmembrane serine protease 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Mauremys reevesii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
Orthologs
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Genomic context

See TMPRSS2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly LG Location
100 current ASM1616193v1 (GCF_016161935.1) 1 NC_052623.1 (161611331..161652551)

Linkage Group 1 - NC_052623.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120377294 Neighboring gene receptor interacting serine/threonine kinase 4 Neighboring gene zinc finger BED domain-containing protein 5-like Neighboring gene interferon-induced GTP-binding protein Mx1-like Neighboring gene uncharacterized LOC120395667 Neighboring gene interferon-induced GTP-binding protein Mx2-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_052623.1 Chromosome 1 Reference ASM1616193v1 Primary Assembly

General protein information

Preferred Names
transmembrane protease serine 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mauremys reevesii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1616193v1 Primary Assembly

Genomic

  1. NC_052623.1 Reference ASM1616193v1 Primary Assembly

    Range
    161611331..161652551
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039520278.1XP_039376212.1  transmembrane protease serine 2 isoform X1

    Conserved Domains (3) summary
    cd00112
    Location:145180
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00190
    Location:290521
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam15494
    Location:185280
    SRCR_2; Scavenger receptor cysteine-rich domain
  2. XM_039520281.1XP_039376215.1  transmembrane protease serine 2 isoform X1

    Conserved Domains (3) summary
    cd00112
    Location:145180
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00190
    Location:290521
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam15494
    Location:185280
    SRCR_2; Scavenger receptor cysteine-rich domain
  3. XM_039520279.1XP_039376213.1  transmembrane protease serine 2 isoform X1

    Conserved Domains (3) summary
    cd00112
    Location:145180
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00190
    Location:290521
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam15494
    Location:185280
    SRCR_2; Scavenger receptor cysteine-rich domain
  4. XM_039520280.1XP_039376214.1  transmembrane protease serine 2 isoform X1

    Conserved Domains (3) summary
    cd00112
    Location:145180
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00190
    Location:290521
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam15494
    Location:185280
    SRCR_2; Scavenger receptor cysteine-rich domain
  5. XM_039520283.1XP_039376217.1  transmembrane protease serine 2 isoform X1

    Conserved Domains (3) summary
    cd00112
    Location:145180
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00190
    Location:290521
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam15494
    Location:185280
    SRCR_2; Scavenger receptor cysteine-rich domain
  6. XM_039520282.1XP_039376216.1  transmembrane protease serine 2 isoform X1

    Conserved Domains (3) summary
    cd00112
    Location:145180
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00190
    Location:290521
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam15494
    Location:185280
    SRCR_2; Scavenger receptor cysteine-rich domain
  7. XM_039520284.1XP_039376218.1  transmembrane protease serine 2 isoform X2

    Conserved Domains (3) summary
    cd00112
    Location:107142
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
    cd00190
    Location:252483
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
    pfam15494
    Location:147242
    SRCR_2; Scavenger receptor cysteine-rich domain
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