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SCN7A sodium voltage-gated channel alpha subunit 7 [ Equus caballus (horse) ]

Gene ID: 100062186, updated on 27-Jun-2020

Summary

Official Symbol
SCN7Aprovided by VGNC
Official Full Name
sodium voltage-gated channel alpha subunit 7provided by VGNC
Primary source
VGNC:VGNC:22741
See related
Ensembl:ENSECAG00000014625
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
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Genomic context

See SCN7A in Genome Data Viewer
Location:
chromosome: 18
Exon count:
26
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 18 NC_009161.3 (46463975..46550535, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 18 NC_009161.2 (46426979..46513760, complement)

Chromosome 18 - NC_009161.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111768915 Neighboring gene sodium voltage-gated channel alpha subunit 9 Neighboring gene uncharacterized LOC111768914 Neighboring gene DNA primase small subunit pseudogene Neighboring gene uncharacterized LOC111768916

Genomic regions, transcripts, and products

General protein information

Preferred Names
sodium channel protein type 7 subunit alpha
Names
sodium channel, voltage-gated, type VII, alpha subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009161.3 Reference EquCab3.0 Primary Assembly

    Range
    46463975..46550535 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014732516.2XP_014588002.1  sodium channel protein type 7 subunit alpha isoform X1

    Conserved Domains (4) summary
    cd13433
    Location:11981249
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:9541201
    Ion_trans; Ion transport protein
    pfam06512
    Location:745930
    Na_trans_assoc; Sodium ion transport-associated
    pfam14797
    Location:809881
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
  2. XM_023623077.1XP_023478845.1  sodium channel protein type 7 subunit alpha isoform X2

    Related
    ENSECAP00000012552.3, ENSECAT00000015601.3
    Conserved Domains (4) summary
    cd13433
    Location:11901241
    Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
    pfam00520
    Location:9281193
    Ion_trans; Ion transport protein
    pfam06512
    Location:737922
    Na_trans_assoc; Sodium ion transport-associated
    pfam16905
    Location:15051560
    GPHH; Voltage-dependent L-type calcium channel, IQ-associated
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