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Gm10857 predicted gene 10857 [ Mus musculus (house mouse) ]

Gene ID: 100038358, updated on 23-Jun-2021

Summary

Official Symbol
Gm10857provided by MGI
Official Full Name
predicted gene 10857provided by MGI
Primary source
MGI:MGI:3641733
See related
Ensembl:ENSMUSG00000102887
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
AU015850
Expression
Low expression observed in reference dataset See more
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Genomic context

See Gm10857 in Genome Data Viewer
Location:
2 A1; 2
Exon count:
2
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (6137680..6145381)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (6132869..6140570)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 2 NC_000068.6 (6053915..6061616)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 30136 Neighboring gene proline and serine rich 2 Neighboring gene TRAF-interacting protein pseudogene Neighboring gene RIKEN cDNA A230108P19 gene Neighboring gene enoyl Coenzyme A hydratase domain containing 3 Neighboring gene predicted gene, 54100 Neighboring gene predicted gene 13383 Neighboring gene predicted gene, 46730

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033470.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) is the longer transcript.
    Source sequence(s)
    AK139587, AK139737, CJ198074
    Related
    ENSMUST00000195343.2
  2. NR_033471.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) has an alternate splice site and is a shorter transcript, as compared to variant 1.
    Source sequence(s)
    AK139587, CJ198074
    Related
    ENSMUST00000195480.2

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    6137680..6145381
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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