symbol

print a summary of an ortholog dataset by NCBI Gene symbol

symbol

print a summary of an ortholog dataset by NCBI Gene symbol

Name

datasets summary ortholog symbol - print a summary of an ortholog dataset by NCBI Gene symbol

Synopsis

datasets summary ortholog symbol <symbol ...> [flags]

Description

Print a summary of an ortholog dataset by NCBI Gene symbol. Ortholog data is calculated by NCBI for vertebrates and insects. The summary is returned in JSON format.

Examples

  datasets summary ortholog symbol brca1 --taxon 9606
  datasets summary ortholog symbol gapdh --taxon 10090
  datasets summary ortholog symbol gnas --taxon 9606 --taxon-filter 9606,10090

Options

      --api-key string         NCBI Datasets API Key
      --as-json                Stream results as a JSON object instead of newline-delimited JSON-Lines
  -h, --help                   help for symbol
      --inputfile string       read a list of gene symbols from a file to use as input
      --no-progressbar         hide progress bar
  -t, --taxon string           Specify a taxonomy ID, species name or NCBI Taxonomy ID (default "human")
      --taxon-filter strings   limit results to ortholog data for a specified taxonomic group
Generated October 18, 2021