datasets

datasets CLI tool reference

Name

datasets - NCBI Datasets

Description

datasets is a command-line tool that is used to query and download biological sequence data across all domains of life from NCBI databases.

Refer to NCBI’s command line quickstart documentation for information about getting started with the command-line tools.

Options

      --api-key string   NCBI Datasets API Key
  -h, --help             help for datasets
      --no-progressbar   hide progress bar

Commands


summary

print a summary of a gene or genome dataset

download

download a gene, genome or coronavirus dataset as a zip file

rehydrate

rehydrate a downloaded, dehydrated dataset

completion

generate autocompletion scripts

version

print the version of this client and exit

Generated October 22, 2021