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NCBI Datasets BETA

NCBI Datasets is a new resource that lets you easily gather data from across NCBI databases. Find and download gene, transcript, protein and genome sequences, annotation and metadata.

What's new

NCBI Insights Feb. 24, 2021

The Datasets command-line tool now provides ortholog data

You can now get gene ortholog data using the NCBI Datasets command-line tool using a gene …

NCBI Insights Jan. 6, 2021

Retrieve genome data by BioProject using the Datasets command-line tool

You can now retrieve genome data using the NCBI Datasets command-line tool and API by simply …

NLM YouTube Dec. 10, 2020

Easy Access to SARS-CoV-2 Genomes and Proteins Through NCBI Datasets

This tutorial describes how to retrieve Coronavirus genome data using NCBI's Datasets web interface. https://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/datasets/ Send...

More news

Genomes

Browse and download eukaryotic genome data using our Genomes table. Access genome data across all domains of life using our command-line tool and API. Genome data includes genome, transcript and protein sequences, genome annotation and metadata.

Browse genomes

Popular species

How to

Genes

Create a customized Gene table to view and download gene data. Gene data is also available through our command-line tool and API. Gene data includes gene, transcript and protein sequences organized by gene.

Get started

Examples

How to

Viruses

Coronavirus genomes

Download SARS-CoV-2 and other coronavirus genome and protein sequences on the web or through our command-line tool and API. Filter by host and release date.

Genomes

SARS-Cov-2 proteins

Download specific SARS-CoV-2 protein sequences on the web or through our command-line tool and API.

Proteins

How to

Command-line tools

Retrieve gene, genome and coronavirus data from the command-line. The Datasets and Dataformat command-line tools are available for Windows, Mac and Linux systems.

Install tool

How to