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Links from Nucleotide

Items: 1 to 20 of 66

1.

Citric acid cycle (TCA cycle)

computationally inferred pathway (not manually curated)

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
2.

Pyruvate metabolism and Citric Acid (TCA) cycle

computationally inferred pathway (not manually curated)

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
3.

The citric acid (TCA) cycle and respiratory electron transport

computationally inferred pathway (not manually curated)

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
4.

Metabolism

computationally inferred pathway (not manually curated)

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
5.

Citrate cycle (TCA cycle, Krebs cycle)

Pathway module; Carbohydrate and lipid metabolism; Central carbohydrate metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
6.

Carbon metabolism

Carbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excluding a cofactor (CoA, CoM, THF, or THMPT) that is replaced by an asterisk. The map contains...

Type
:
pathway
Taxonomic scope
:
conserved biosystem
7.

Carbon metabolism

Carbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excluding a cofactor (CoA, CoM, THF, or THMPT) that is replaced by an asterisk. The map contains...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
8.

Biosynthesis of amino acids

This map presents a modular architecture of the biosynthesis pathways of twenty amino acids, which may be viewed as consisting of the core part and its extensions. The core part is the KEGG module for conversion of three-carbon compounds from glyceraldehyde-3P to pyruvate [MD:M00002],...

Type
:
pathway
Taxonomic scope
:
conserved biosystem
9.

Biosynthesis of amino acids

This map presents a modular architecture of the biosynthesis pathways of twenty amino acids, which may be viewed as consisting of the core part and its extensions. The core part is the KEGG module for conversion of three-carbon compounds from glyceraldehyde-3P to pyruvate [MD:M00002],...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
10.

single-organism cellular process

Any process that is carried out at the cellular level, occurring within a single organism.

Type
:
pathway
Taxonomic scope
:
conserved biosystem
BSID:
751905
GO
: GO:0044763
11.

single-organism metabolic process

A metabolic process - chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances - which involves a single organism.

Type
:
pathway
Taxonomic scope
:
conserved biosystem
BSID:
751852
GO
: GO:0044710
12.

single-organism process

A biological process that involves only one organism. Synonym: single organism process;

Type
:
pathway
Taxonomic scope
:
conserved biosystem
BSID:
751843
GO
: GO:0044699
13.

2-Oxocarboxylic acid metabolism

2-Oxocarboxylic acids, also called 2-oxo acids and alpha-keto acids, are the most elementary set of metabolites that includes pyruvate (2-oxopropanoate), 2-oxobutanoate, oxaloacetate (2-oxosuccinate) and 2-oxoglutarate. This diagram illustrates the architecture of chain extension...

Type
:
pathway
Taxonomic scope
:
conserved biosystem
14.

2-Oxocarboxylic acid metabolism

2-Oxocarboxylic acids, also called 2-oxo acids and alpha-keto acids, are the most elementary set of metabolites that includes pyruvate (2-oxopropanoate), 2-oxobutanoate, oxaloacetate (2-oxosuccinate) and 2-oxoglutarate. This diagram illustrates the architecture of chain extension...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
15.

tricarboxylic acid metabolic process

The chemical reactions and pathways involving dicarboxylic acids, any organic acid containing three carboxyl (COOH) groups or anions (COO-). Synonym: tricarboxylic acid metabolism;

Type
:
pathway
Taxonomic scope
:
conserved biosystem
BSID:
517266
GO
: GO:0072350
16.

organic substance metabolic process

The chemical reactions and pathways involving an organic substance, any molecular entity containing carbon. Synonyms: organic molecular entity metabolic process; organic molecular entity metabolism; organic substance metabolism;

Type
:
pathway
Taxonomic scope
:
conserved biosystem
BSID:
516628
GO
: GO:0071704
17.

metal cluster binding

Interacting selectively and non-covalently with a cluster of atoms including both metal ions and nonmetal atoms, usually sulfur and oxygen. Examples include iron-sulfur clusters and nickel-iron-sulfur clusters.

Type
:
functional_set
Taxonomic scope
:
conserved biosystem
BSID:
512418
GO
: GO:0051540
18.

4 iron, 4 sulfur cluster binding

Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. Synonyms: 4 Fe 4 S cluster binding; 4 iron, 4 sulphur cluster binding;...

Type
:
functional_set
Taxonomic scope
:
conserved biosystem
BSID:
512417
GO
: GO:0051539
19.

iron-sulfur cluster binding

Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms. Synonyms: Fe/S binding; iron sulfur cluster binding; iron sulphur cluster binding; iron-sulphur cluster binding;

Type
:
functional_set
Taxonomic scope
:
conserved biosystem
BSID:
512414
GO
: GO:0051536
20.

cellular respiration

The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which either requires oxygen (aerobic respiration) or does not (anaerobic respiration). Synonyms: oxidative metabolic process; oxidative metabolism; respiration;

Type
:
pathway
Taxonomic scope
:
conserved biosystem
BSID:
507690
GO
: GO:0045333

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