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Links from BioSystems

Items: 1 to 20 of 40

1.

N-Glycan biosynthesis

N-glycans or asparagine-linked glycans are major constituents of glycoproteins in eukaryotes. N-glycans are covalently attached to asparagine with the consensus sequence of Asn-X-Ser/Thr by an N-glycosidic bond, GlcNAc b1- Asn. Biosynthesis of N-glycans begins on the cytoplasmic face...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
2.

N-glycan biosynthesis, complex type

Pathway module; Carbohydrate and lipid metabolism; Glycan metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
BSID:
550719
KEGG
: dre_M00075
3.

N-glycan precursor biosynthesis

Pathway module; Carbohydrate and lipid metabolism; Glycan metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
4.

N-glycan antennae elongation in the medial/trans-Golgi

computationally inferred pathway (not manually curated)

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
5.

N-Glycan antennae elongation

computationally inferred pathway (not manually curated)

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
6.

Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein

computationally inferred pathway (not manually curated)

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
7.

Asparagine N-linked glycosylation

computationally inferred pathway (not manually curated)

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
8.

N-glycosylation by oligosaccharyltransferase

Pathway module; Carbohydrate and lipid metabolism; Glycan metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
9.

Other types of O-glycan biosynthesis

O-linked glycosylation is the attachment of monosaccharides to the hydroxyl groups of amino acids, mostly serine and threonine, and is found in eukaryotes, archaea and bacteria. O-glycans exhibit diverse types of modifications where the innermost monosaccharide is N-acetylgalactosamine...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
10.

Transport to the Golgi and subsequent modification

computationally inferred pathway (not manually curated)

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
11.

N-glycan trimming and elongation in the cis-Golgi

computationally inferred pathway (not manually curated)

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
12.

Glycosaminoglycan biosynthesis - keratan sulfate

Keratan sulfate (KS) is a glycosaminoglycan with the basic disaccharide unit of N-acetyllactosamine, Gal(b1-4)GlcNAc(b1-3), with sulfate esters at C-6 of GlcNAc and Gal residues. There are two types of KS distinguished by the protein linkage: type I for N-linked via the N-glycan core...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
13.

Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer

Pathway module; Carbohydrate and lipid metabolism; Glycan metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
BSID:
401494
KEGG
: dre_M00071
14.

N-glycan precursor trimming

Pathway module; Carbohydrate and lipid metabolism; Glycan metabolism

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
BSID:
401496
KEGG
: dre_M00073
15.

Glycosphingolipid biosynthesis - lacto and neolacto series

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
BSID:
83579
KEGG
: dre00601
16.

Mannose type O-glycan biosynthesis

Biosynthesis of mammalian O-mannosyl glycans is initiated by the transfer of mannose from mannose-P-Dol to serine or threonine residue, followed by extensions with N-acetylglucosamine (GlcNAc) and galactose (Gal) to generate core M1, M2 and M3 glycans. Core M1 and M2 glycans can then...

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
17.

Synthesis of substrates in N-glycan biosythesis

computationally inferred pathway (not manually curated)

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
18.

Keratan sulfate biosynthesis

computationally inferred pathway (not manually curated)

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
19.

Keratan sulfate/keratin metabolism

computationally inferred pathway (not manually curated)

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio
20.

Termination of O-glycan biosynthesis

computationally inferred pathway (not manually curated)

Type
:
pathway
Taxonomic scope
:
organism-specific biosystem
Organism
:
Danio rerio

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