Format

Send to:

Choose Destination

Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Identifiers
BioSample: SAMEA7321000; SRA: ERS5079536
Organism
Sminthopsis longicaudata (long-tailed dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis
Attributes
geographic locationAustralia
investigation typephylogenetic study
sample name40091
sexnot determined
tissuekidney | liver
AtlasLivingAustraliahttps://biocache.ala.org.au/occurrences/b29db762-ca49-410b-87e3-724f4712cf57
BPA_library_ID52722
BPA_sample_ID40091
CALLABLE1825858
DNA extraction methodsalting out
ENA first public2021-01-05
ENA last update2020-09-25
ENA-CHECKLISTERC000011
External IdSAMEA7321000
INSDC center aliasAUSTRALIAN NATIONAL UNIVERSITY
INSDC center nameAUSTRALIAN NATIONAL UNIVERSITY
INSDC first public2021-01-05T04:27:28Z
INSDC last update2020-09-25T00:33:39Z
INSDC statuspublic
LOW_COVERAGE139803
NO_COVERAGE204
ReadLength100bp
Submitter Id40091
TCCP_ID40091_LANES3
bioproject_accessionPRJEB39788
classMammalia
collectionMammal
common namelong-tailed dunnart
depthmean644.7
depthmedian290
familyDasyuridae
genusSminthopsis
geographic location (region and locality)Western Australia
institution_nameAustralian Biological Tissue Collection, South Australian Museum
location_textYoung Range
orderDasyuromorphia
phylumChordata
sequencing methodIllumina SBS, short PE reads
specieslongicaudata
state_or_regionWestern Australia
tissue_numberABTC07758
tissue_preservationfrozen
totalmapped2tgt0.5224
totalpaired0.4766
totalreadsstart26302906
voucher_numberWAM M24531
voucher_or_tissue_numberWAM M24531
wild_captivewild
BioProject
PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Submission
EBI; 2021-01-06
Accession:
SAMEA7321000
ID:
17239457

Supplemental Content

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center