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Australian marsupial phylogenetic study. Bioplatforms Australia and Oz Mammals Genomics.

Identifiers
BioSample: SAMEA7321340; SRA: ERS5079875
Organism
Sminthopsis dolichura (little long-tailed dunnart)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis
Attributes
geographic locationAustralia
identified byCatherine Kemper | David Stemmer
investigation typephylogenetic study
sample name55360
sexnot determined
tissueliver
AtlasLivingAustraliahttps://biocache.ala.org.au/occurrences/301289df-ba4c-4a6a-9a84-f8ffa5a7e2f5
BPA_library_ID55360
BPA_sample_ID41949
CALLABLE1418524
DNA extraction methodsalting out
ENA first public2021-01-05
ENA last update2020-09-25
ENA-CHECKLISTERC000011
External IdSAMEA7321340
INSDC center aliasAUSTRALIAN NATIONAL UNIVERSITY
INSDC center nameAUSTRALIAN NATIONAL UNIVERSITY
INSDC first public2021-01-05T04:27:29Z
INSDC last update2020-09-25T00:43:19Z
INSDC statuspublic
LOW_COVERAGE134524
NO_COVERAGE208
ReadLength150bp
Submitter Id55360
TCCP_ID55360_HWWJFAFXY_CAGGAGG_S37
bioproject_accessionPRJEB39788
classMammalia
collectionMammal
common namelittle long-tailed dunnart
decimal_latitude-29.62
decimal_longitude117.42
depthmean97.92
depthmedian72
familyDasyuridae
genusSminthopsis
geographic location (region and locality)Western Australia
institution_nameAustralian Biological Tissue Collection, South Australian Museum
location_textMount Gibson South
orderDasyuromorphia
phylumChordata
sequencing methodIllumina SBS, short PE reads
speciesdolichura
state_or_regionWestern Australia
tissue_numberABTC82565
tissue_preservationethanol | frozen
totalmapped2tgt0.7614
totalpaired0.7482
totalreadsstart1569656
voucher_numberSAMA M23018
voucher_or_tissue_numberSAMA M23018
BioProject
PRJEB39788 Australian marsupial phylogeny
Retrieve all samples from this project

Submission
EBI; 2021-01-06
Accession:
SAMEA7321340
ID:
17239796

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