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Links from Protein

Accession: PRJNA353170 ID: 353170

Escherichia coli

Whole genome sequencing of CTX-M-14-producing Escherichia coli of animal and human origin: insights into dissemination of blaCTX-M-14

See Genome Information for Escherichia coli
The aim of this study was to identify the mechanisms of dissemination of this CTX-M variant within and between host species in a defined time period and geographical area.
AccessionPRJNA353170
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismEscherichia coli[Taxonomy ID: 562]
Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
SubmissionRegistration date: 26-Mar-2019
Hvidovre Hospital - University of Copenhagen
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)4267
WGS master37
Protein Sequences187512
Other datasets
BioSample37
Assembly37
Assembly details:
Assembly levelNumber of Assemblies
34
3
37
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_004380855.1ScaffoldMTYF00000000SAMN06011369
2771-8
GCA_004380335.1ScaffoldMTXF00000000SAMN06011343
2274-3
GCA_004380375.1ContigMTXH00000000SAMN06011345
6869-25
GCA_004380355.1ScaffoldMTXG00000000SAMN06011344
6869-14
GCA_004380315.1ScaffoldMTXE00000000SAMN06011342
1493-3
GCA_004380265.1ScaffoldMTXB00000000SAMN06011339
2700-1
GCA_004380285.1ScaffoldMTXD00000000SAMN06011341
670-7A
GCA_004380255.1ContigMTXC00000000SAMN06011340
422-16A
GCA_004380235.1ScaffoldMTXA00000000SAMN06011338
2698-1
GCA_004380225.1ScaffoldMTWZ00000000SAMN06011337
2469-1
GCA_004380145.1ScaffoldMTWW00000000SAMN06011334
823-1
GCA_004380175.1ScaffoldMTWY00000000SAMN06011336
1276-1
GCA_004380165.1ScaffoldMTWV00000000SAMN06011333
M5.A.24.P-A
GCA_004380155.1ScaffoldMTWX00000000SAMN06011335
1034-1
GCA_004380845.1ScaffoldMTYE00000000SAMN06011368
2764-11
GCA_004380795.1ScaffoldMTYB00000000SAMN06011365
2763-6
GCA_004380805.1ContigMTYD00000000SAMN06011367
2763-16
GCA_004380765.1ScaffoldMTYA00000000SAMN06011364
HvH-Ec78
GCA_004380775.1ScaffoldMTYC00000000SAMN06011366
2763-9
GCA_004380735.1ScaffoldMTXZ00000000SAMN06011363
HvH-Ec82
GCA_004380635.1ScaffoldMTXW00000000SAMN06011360
HvH-Ec76
GCA_004380705.1ScaffoldMTXY00000000SAMN06011362
HvH-Ec81
GCA_004380725.1ScaffoldMTXX00000000SAMN06011361
HvH-Ec77
GCA_004380655.1ScaffoldMTXU00000000SAMN06011358
E23
GCA_004380625.1ScaffoldMTXV00000000SAMN06011359
HvH-Ec75
GCA_004380645.1ScaffoldMTXT00000000SAMN06011357
E20
GCA_004380615.1ScaffoldMTXS00000000SAMN06011356
P67
GCA_004380535.1ScaffoldMTXO00000000SAMN06011352
P08
GCA_004380525.1ScaffoldMTXP00000000SAMN06011353
P33
GCA_004380545.1ScaffoldMTXQ00000000SAMN06011354
P58
GCA_004380555.1ScaffoldMTXR00000000SAMN06011355
P60
GCA_004380515.1ScaffoldMTXN00000000SAMN06011351
3808-3
GCA_004380435.1ScaffoldMTXJ00000000SAMN06011347
7624-10
GCA_004380475.1ScaffoldMTXL00000000SAMN06011349
3217-1
GCA_004380405.1ScaffoldMTXI00000000SAMN06011346
6869-33
GCA_004380445.1ScaffoldMTXM00000000SAMN06011350
3217-3
GCA_004380425.1ScaffoldMTXK00000000SAMN06011348
2080-1

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