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Accession: PRJNA379596 ID: 379596

mine drainage metagenome

Mine wastewater metagenomics

Metagenomic sequencing of microbial communities across a landscape impacted by an active nickel and copper mine in Ontario, Canada. More...
AccessionPRJNA379596
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismmine drainage metagenome[Taxonomy ID: 410659]
unclassified sequences; metagenomes; ecological metagenomes; mine drainage metagenome
SubmissionRegistration date: 16-Aug-2017
None
Related Resources
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)101265
WGS master272
SRA Experiments15
Protein Sequences666321
Other datasets
BioSample288
Assembly272
Assembly details:
Assembly levelNumber of Assemblies
228
44
272
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_002255185.1ScaffoldNCAG00000000SAMN06622457
20-64-4
GCA_002255515.1ContigNCAS00000000SAMN06622445
20-67-58
GCA_002255745.1ContigNCBH00000000SAMN06622429
21-60-14
GCA_002255545.1ContigNCAW00000000SAMN06622441
21-62-4
GCA_002255645.1ScaffoldNCBK00000000SAMN06622426
21-66-27
GCA_002279225.1ContigNCBM00000000SAMN06622424
21-68-69
GCA_002282645.1ScaffoldNCJY00000000SAMN06622204
34-60-192
GCA_002282635.1ScaffoldNCJX00000000SAMN06622205
34-64-41
GCA_002279355.1ContigNCBV00000000SAMN06622415
37-60-79
GCA_002279345.1ContigNCBU00000000SAMN06622416
37-64-53
GCA_002279335.1ScaffoldNCBT00000000SAMN06622417
37-67-22
GCA_002255305.1ScaffoldNCBC00000000SAMN06622434
21-59-9
GCA_002279205.1ContigNCBG00000000SAMN06622430
21-70-11
GCA_002279195.1ScaffoldNCBN00000000SAMN06622423
37-65-4
GCA_002279285.1ScaffoldNCBR00000000SAMN06622419
37-71-11
GCA_002279415.1ScaffoldNCBZ00000000SAMN06622411
12-62-4
GCA_002255575.1ScaffoldNCAT00000000SAMN06622444
20-57-95
GCA_002255785.1ScaffoldNCAQ00000000SAMN06622447
20-58-15
GCA_002255625.1ScaffoldNCAK00000000SAMN06622453
20-61-6
GCA_002255455.1ScaffoldNCAL00000000SAMN06622452
20-63-7
GCA_002255715.1ScaffoldNCBB00000000SAMN06622435
21-58-7
GCA_002281005.1ScaffoldNCFD00000000SAMN06622329
35-58-6
GCA_002281795.1ScaffoldNCHE00000000SAMN06622276
16-64-162
GCA_002282295.1ScaffoldNCIT00000000SAMN06622235
17-64-282
GCA_002257135.1ScaffoldNCHK00000000SAMN06622270
24-64-9
GCA_002278845.1ScaffoldNCGE00000000SAMN06622302
28-64-14
GCA_002280295.1ScaffoldNCDR00000000SAMN06622367
32-64-7
GCA_002281195.1ScaffoldNCFM00000000SAMN06622320
35-64-16
GCA_002282335.1ContigNCJC00000000SAMN06622226
39-64-12
GCA_002255315.1ContigNCBD00000000SAMN06622433
21-64-8
GCA_002255565.1ScaffoldNCBE00000000SAMN06622432
21-73-9
GCA_002280005.1ScaffoldNCDD00000000SAMN06622381
32-41-5
GCA_002280175.1ScaffoldNCDM00000000SAMN06622372
32-45-6
GCA_002280155.1ScaffoldNCDK00000000SAMN06622374
32-51-5
GCA_002278995.1ScaffoldNCJW00000000SAMN06622206
34-51-39
GCA_002257235.1ContigNCGZ00000000SAMN06622281
16-39-46
GCA_002282095.1ScaffoldNCIO00000000SAMN06622240
17-39-52
GCA_002280725.1ScaffoldNCEM00000000SAMN06622346
32-64-14
GCA_002279985.1ScaffoldNCDC00000000SAMN06622382
32-58-5
GCA_002279595.1ScaffoldNCCJ00000000SAMN06622401
12-66-6
GCA_002280795.1ScaffoldNCES00000000SAMN06622340
32-67-21
GCA_002281175.1ScaffoldNCFL00000000SAMN06622321
35-67-15
GCA_002280945.1ScaffoldNCFB00000000SAMN06622331
35-67-5
GCA_002282175.1ScaffoldNCIW00000000SAMN06622232
39-67-5
GCA_002256765.1ScaffoldNCHJ00000000SAMN06622271
24-39-8
GCA_002256935.1ScaffoldNCGL00000000SAMN06622295
28-41-41
GCA_002279705.1ScaffoldNCCO00000000SAMN06622396
12-68-7
GCA_002280235.1ScaffoldNCDO00000000SAMN06622370
32-68-6
GCA_002280915.1ScaffoldNCEZ00000000SAMN06622333
35-63-5
GCA_002280325.1ScaffoldNCDT00000000SAMN06622365
32-68-7
GCA_002279665.1ScaffoldNCCM00000000SAMN06622398
12-68-7
GCA_002280775.1ScaffoldNCER00000000SAMN06622341
32-68-21
GCA_002280785.1ContigNCEQ00000000SAMN06622342
32-68-21
GCA_002280475.1ScaffoldNCEB00000000SAMN06622357
32-69-9
GCA_002279485.1ScaffoldNCCC00000000SAMN06622408
12-64-5
GCA_002255705.1ScaffoldNCAU00000000SAMN06622443
21-58-4
GCA_002281915.1ScaffoldNCHS00000000SAMN06622262
24-55-52
GCA_002281415.1ScaffoldNCFZ00000000SAMN06622307
28-67-8
GCA_002282515.1ScaffoldNCJQ00000000SAMN06622212
34-67-9
GCA_002281275.1ContigNCFR00000000SAMN06622315
35-55-47
GCA_002282445.1ContigNCJK00000000SAMN06622218
39-55-53
GCA_002281685.1ScaffoldNCGU00000000SAMN06622286
16-40-21
GCA_002279965.1ScaffoldNCDA00000000SAMN06622384
32-45-3
GCA_002280165.1ScaffoldNCDL00000000SAMN06622373
32-49-10
GCA_002280635.1ScaffoldNCEI00000000SAMN06622350
32-49-12
GCA_002280525.1ScaffoldNCEC00000000SAMN06622356
32-50-10
GCA_002280625.1ScaffoldNCEK00000000SAMN06622348
32-50-13
GCA_002279625.1ScaffoldNCCK00000000SAMN06622400
12-67-6
GCA_002280875.1ScaffoldNCEV00000000SAMN06622337
32-67-35
GCA_002280925.1ScaffoldNCEY00000000SAMN06622334
35-67-4
GCA_002282475.1ScaffoldNCIV00000000SAMN06622233
39-67-4
GCA_002280275.1ScaffoldNCDQ00000000SAMN06622368
32-67-7
GCA_002280225.1ScaffoldNCDP00000000SAMN06622369
32-67-6
GCA_002280485.1ScaffoldNCED00000000SAMN06622355
32-69-10
GCA_002279095.1ScaffoldNCKG00000000SAMN06622196
14-74-6
GCA_002255365.1ContigNCBI00000000SAMN06622428
21-64-14
GCA_002279575.1ScaffoldNCCH00000000SAMN06622403
12-60-6
GCA_002280595.1ScaffoldNCEG00000000SAMN06622352
32-67-11
GCA_002255285.1ScaffoldNCAY00000000SAMN06622439
21-66-5
GCA_002279275.1ScaffoldNCBQ00000000SAMN06622420
37-65-8
GCA_002278985.1ScaffoldNCJP00000000SAMN06622213
34-65-8
GCA_002255765.1ContigNCBL00000000SAMN06622425
21-44-67
GCA_002279055.1ScaffoldNCJZ00000000SAMN06622203
34-44-207
GCA_002279305.1ContigNCBS00000000SAMN06622418
37-45-19
GCA_002280815.1ScaffoldNCET00000000SAMN06622339
32-34-25
GCA_002280395.1ScaffoldNCDW00000000SAMN06622362
32-35-8
GCA_002257185.1ScaffoldNCHU00000000SAMN06622260
24-53-125
GCA_002281365.1ScaffoldNCFU00000000SAMN06622312
35-53-114
GCA_002278935.1ContigNCJL00000000SAMN06622217
39-52-133
GCA_002281735.1ScaffoldNCGK00000000SAMN06622296
28-57-27
GCA_002255295.1ScaffoldNCBA00000000SAMN06622436
21-71-4
GCA_002279175.1ScaffoldNCKQ00000000SAMN06622186
13-55-115
GCA_002257465.1ScaffoldNCKR00000000SAMN06622185
13-55-253
GCA_002279115.1ScaffoldNCKJ00000000SAMN06622193
14-55-98
GCA_002282755.1ScaffoldNCKL00000000SAMN06622191
14-56-357
GCA_002282715.1ScaffoldNCKC00000000SAMN06622200
15-55-196
GCA_002255225.1ScaffoldNCAR00000000SAMN06622446
20-53-49
GCA_002255445.1ScaffoldNCAJ00000000SAMN06622454
20-54-6
GCA_002257325.1ScaffoldNCHR00000000SAMN06622263
24-54-40
GCA_002278835.1ScaffoldNCFX00000000SAMN06622309
28-55-5
GCA_002281295.1ScaffoldNCFS00000000SAMN06622314
35-54-62
GCA_002282415.1ScaffoldNCJI00000000SAMN06622220
39-53-45
GCA_002279795.1ScaffoldNCCT00000000SAMN06622391
12-61-10
GCA_002279535.1ScaffoldNCCF00000000SAMN06622405
12-63-5
GCA_002279885.1ScaffoldNCCW00000000SAMN06622388
12-64-13
GCA_002279605.1ScaffoldNCCI00000000SAMN06622402
12-64-6
GCA_002257045.1ScaffoldNCHD00000000SAMN06622277
16-61-112
GCA_002281655.1ScaffoldNCGR00000000SAMN06622289
16-62-9
GCA_002256995.1ContigNCGX00000000SAMN06622283
16-64-40
GCA_002281775.1ScaffoldNCGY00000000SAMN06622282
16-64-46
GCA_002282235.1ScaffoldNCIR00000000SAMN06622237
17-61-76
GCA_002256785.1ScaffoldNCIF00000000SAMN06622249
17-61-9
GCA_002282155.1ScaffoldNCIE00000000SAMN06622250
17-62-8
GCA_002281975.1ScaffoldNCIH00000000SAMN06622247
17-64-11
GCA_002256885.1ScaffoldNCIL00000000SAMN06622243
17-64-34
GCA_002282115.1ScaffoldNCIQ00000000SAMN06622238
17-64-65
GCA_002281435.1ScaffoldNCGA00000000SAMN06622306
28-61-11
GCA_002281555.1ContigNCGJ00000000SAMN06622297
28-61-23
GCA_002280425.1ScaffoldNCDZ00000000SAMN06622359
32-62-9
GCA_002279935.1ScaffoldNCCZ00000000SAMN06622385
12-62-95
GCA_002280885.1ScaffoldNCEW00000000SAMN06622336
32-62-53
GCA_002280065.1ScaffoldNCDG00000000SAMN06622378
32-62-5
GCA_002282565.1ScaffoldNCJT00000000SAMN06622209
34-62-18
GCA_002279005.1ScaffoldNCJS00000000SAMN06622210
34-48-12
GCA_002255885.1ScaffoldNCBO00000000SAMN06622422
37-53-5
GCA_002255255.1ScaffoldNCAV00000000SAMN06622442
21-45-4
GCA_002282495.1ScaffoldNCJO00000000SAMN06622214
34-60-7
GCA_002281025.1ScaffoldNCFE00000000SAMN06622328
35-46-6
GCA_002257285.1ScaffoldNCIA00000000SAMN06622254
17-43-7
GCA_002282135.1ScaffoldNCID00000000SAMN06622251
17-44-8
GCA_002257155.1ScaffoldNCGS00000000SAMN06622288
16-45-7
GCA_002281625.1ScaffoldNCGQ00000000SAMN06622290
16-45-9
GCA_002281475.1ScaffoldNCGC00000000SAMN06622304
28-44-11
GCA_002282245.1ScaffoldNCIZ00000000SAMN06622229
39-45-7
GCA_002257375.1ScaffoldNCIB00000000SAMN06622253
17-45-7
GCA_002281815.1ScaffoldNCHI00000000SAMN06622272
24-45-7
GCA_002279505.1ScaffoldNCCD00000000SAMN06622407
12-65-5
GCA_002257455.1ContigNCKN00000000SAMN06622189
13-71-7
GCA_002257395.1ContigNCKF00000000SAMN06622197
14-71-5
GCA_002280615.1ScaffoldNCEJ00000000SAMN06622349
32-70-13
GCA_002255665.1ScaffoldNCAF00000000SAMN06622458
20-66-4
GCA_002279815.1ScaffoldNCCU00000000SAMN06622390
12-62-10
GCA_002279875.1ScaffoldNCCS00000000SAMN06622392
12-63-9
GCA_002279725.1ScaffoldNCCP00000000SAMN06622395
12-64-8
GCA_002281675.1ScaffoldNCGT00000000SAMN06622287
16-62-11
GCA_002256775.1ScaffoldNCII00000000SAMN06622246
17-62-19
GCA_002281995.1ScaffoldNCIC00000000SAMN06622252
17-62-8
GCA_002256795.1ScaffoldNCIG00000000SAMN06622248
17-62-9
GCA_002256985.1ContigNCGO00000000SAMN06622292
28-62-57
GCA_002280675.1ScaffoldNCEN00000000SAMN06622345
32-60-15
GCA_002280995.1ScaffoldNCFC00000000SAMN06622330
35-62-5
GCA_002255415.1ScaffoldNCAH00000000SAMN06622456
20-58-5
GCA_002255585.1ContigNCBJ00000000SAMN06622427
21-54-25
GCA_002255405.1ContigNCBF00000000SAMN06622431
21-58-10
GCA_002255385.1ScaffoldNCBP00000000SAMN06622421
37-58-5
GCA_002279375.1ScaffoldNCBX00000000SAMN06622413
12-60-4
GCA_002279215.1ScaffoldNCAZ00000000SAMN06622438
21-64-5
GCA_002281715.1ScaffoldNCGW00000000SAMN06622284
16-63-31
GCA_002282035.1ContigNCIK00000000SAMN06622244
17-63-33
GCA_002281935.1ScaffoldNCHV00000000SAMN06622259
24-62-144
GCA_002281895.1ScaffoldNCHP00000000SAMN06622265
24-63-21
GCA_002256925.1ScaffoldNCGI00000000SAMN06622298
28-63-22
GCA_002281395.1ScaffoldNCFW00000000SAMN06622310
35-63-240
GCA_002281265.1ContigNCFQ00000000SAMN06622316
35-63-35
GCA_002278975.1ScaffoldNCJN00000000SAMN06622215
39-63-203
GCA_002278925.1ContigNCJH00000000SAMN06622221
39-63-25
GCA_002257105.1ScaffoldNCHC00000000SAMN06622278
16-46-70
GCA_002256855.1ScaffoldNCIP00000000SAMN06622239
17-46-58
GCA_002257215.1ScaffoldNCHT00000000SAMN06622261
24-46-87
GCA_002280125.1ScaffoldNCDJ00000000SAMN06622375
32-46-5
GCA_002281105.1ScaffoldNCFJ00000000SAMN06622323
35-46-11
GCA_002281335.1ScaffoldNCFV00000000SAMN06622311
35-46-207
GCA_002282485.1ScaffoldNCJM00000000SAMN06622216
39-45-136
GCA_002282275.1ScaffoldNCJB00000000SAMN06622227
39-46-10
GCA_002280025.1ScaffoldNCDE00000000SAMN06622380
32-42-5
GCA_002280035.1ScaffoldNCDF00000000SAMN06622379
32-61-5
GCA_002282595.1ScaffoldNCJV00000000SAMN06622207
34-62-33
GCA_002279695.1ScaffoldNCCN00000000SAMN06622397
12-66-7
GCA_002279855.1ScaffoldNCCY00000000SAMN06622386
12-68-15
GCA_002281955.1ScaffoldNCHZ00000000SAMN06622255
17-65-6
GCA_002257205.1ScaffoldNCHM00000000SAMN06622268
24-66-13
GCA_002304505.1ScaffoldNCEH00000000SAMN06622351
32-66-11
GCA_002280205.1ScaffoldNCDN00000000SAMN06622371
32-66-8
GCA_002281255.1ScaffoldNCFP00000000SAMN06622317
35-66-30
GCA_002281075.1ScaffoldNCFG00000000SAMN06622326
35-68-8
GCA_002282365.1ScaffoldNCJF00000000SAMN06622223
39-66-18
GCA_002279755.1ScaffoldNCCQ00000000SAMN06622394
12-64-8
GCA_002279895.1ScaffoldNCCX00000000SAMN06622387
12-65-15
GCA_002257365.1ScaffoldNCHW00000000SAMN06622258
17-64-5
GCA_002280705.1ContigNCEL00000000SAMN06622347
32-64-14
GCA_002280315.1ScaffoldNCDS00000000SAMN06622366
32-66-7
GCA_002280405.1ScaffoldNCDY00000000SAMN06622360
32-66-9
GCA_002280515.1ScaffoldNCEA00000000SAMN06622358
32-67-9
GCA_002282555.1ScaffoldNCJR00000000SAMN06622211
34-62-10
GCA_002279405.1ScaffoldNCBY00000000SAMN06622412
12-54-5
GCA_002279455.1ScaffoldNCCB00000000SAMN06622409
12-71-4
GCA_002255215.1ScaffoldNCAO00000000SAMN06622449
20-58-10
GCA_002255495.1ContigNCAP00000000SAMN06622448
20-60-12
GCA_002255195.1ScaffoldNCAM00000000SAMN06622451
20-64-7
GCA_002281855.1ScaffoldNCHQ00000000SAMN06622264
24-66-33
GCA_002304495.1ScaffoldNCEX00000000SAMN06622335
35-44-4
GCA_002281325.1ScaffoldNCFT00000000SAMN06622313
35-66-84
GCA_002282435.1ScaffoldNCJJ00000000SAMN06622219
39-66-50
GCA_002279465.1ScaffoldNCCA00000000SAMN06622410
12-47-4
GCA_002257025.1ContigNCHA00000000SAMN06622280
16-39-50
GCA_002282055.1ScaffoldNCIM00000000SAMN06622242
17-39-43
GCA_002257055.1ScaffoldNCHF00000000SAMN06622275
24-40-4
GCA_002282195.1ScaffoldNCIX00000000SAMN06622231
39-40-5
GCA_002281875.1ScaffoldNCHN00000000SAMN06622267
24-36-13
GCA_002281575.1ScaffoldNCGN00000000SAMN06622293
28-36-52
GCA_002279945.1ScaffoldNCDB00000000SAMN06622383
32-37-4
GCA_002281185.1ScaffoldNCFK00000000SAMN06622322
35-36-14
GCA_002280935.1ScaffoldNCFA00000000SAMN06622332
35-40-5
GCA_002281085.1ScaffoldNCFH00000000SAMN06622325
35-40-8
GCA_002278915.1ScaffoldNCJE00000000SAMN06622224
39-36-14
GCA_002282285.1ScaffoldNCJA00000000SAMN06622228
39-39-8
GCA_002280085.1ScaffoldNCDI00000000SAMN06622376
32-64-5
GCA_002279525.1ScaffoldNCCE00000000SAMN06622406
12-62-5
GCA_002279825.1ScaffoldNCCV00000000SAMN06622389
12-68-11
GCA_002257315.1ScaffoldNCHY00000000SAMN06622256
17-56-6
GCA_002257085.1ContigNCHO00000000SAMN06622266
24-56-14
GCA_002278855.1ContigNCGG00000000SAMN06622300
28-55-16
GCA_002281585.1ContigNCGM00000000SAMN06622294
28-56-43
GCA_002281615.1ContigNCGP00000000SAMN06622291
28-64-96
GCA_002280685.1ScaffoldNCEO00000000SAMN06622344
32-64-17
GCA_002280755.1ScaffoldNCEP00000000SAMN06622343
32-64-22
GCA_002280855.1ScaffoldNCEU00000000SAMN06622338
32-65-25
GCA_002280365.1ScaffoldNCDV00000000SAMN06622363
32-67-7
GCA_002280335.1ScaffoldNCDU00000000SAMN06622364
32-68-7
GCA_002281235.1ScaffoldNCFO00000000SAMN06622318
35-56-22
GCA_002282385.1ContigNCJG00000000SAMN06622222
39-57-19
GCA_002256875.1ScaffoldNCIU00000000SAMN06622234
39-62-4
GCA_002279655.1ScaffoldNCCL00000000SAMN06622399
12-62-6
GCA_002278865.1ScaffoldNCGB00000000SAMN06622305
28-62-11
GCA_002281505.1ContigNCGH00000000SAMN06622299
28-62-20
GCA_002281535.1ScaffoldNCGD00000000SAMN06622303
28-63-12
GCA_002281485.1ContigNCGF00000000SAMN06622301
28-66-16
GCA_002280555.1ScaffoldNCEE00000000SAMN06622354
32-62-10
GCA_002280565.1ScaffoldNCEF00000000SAMN06622353
32-66-10
GCA_002282775.1ContigNCKI00000000SAMN06622194
14-69-23
GCA_002282015.1ScaffoldNCIJ00000000SAMN06622245
17-40-25
GCA_002257125.1ScaffoldNCHH00000000SAMN06622273
24-42-5
GCA_002281755.1ContigNCHB00000000SAMN06622279
16-42-52
GCA_002256845.1ScaffoldNCIS00000000SAMN06622236
17-42-90
GCA_002281835.1ScaffoldNCHL00000000SAMN06622269
24-42-9
GCA_002281405.1ScaffoldNCFY00000000SAMN06622308
28-43-6
GCA_002281155.1ScaffoldNCFN00000000SAMN06622319
35-42-20
GCA_002282355.1ScaffoldNCJD00000000SAMN06622225
39-42-12
GCA_002282795.1ScaffoldNCKP00000000SAMN06622187
13-64-67
GCA_002282785.1ScaffoldNCKO00000000SAMN06622188
13-66-29
GCA_002279145.1ScaffoldNCKK00000000SAMN06622192
14-64-326
GCA_002279105.1ContigNCKE00000000SAMN06622198
14-66-4
GCA_002282725.1ScaffoldNCKD00000000SAMN06622199
15-63-373
GCA_002282675.1ContigNCKA00000000SAMN06622202
15-66-11
GCA_002255655.1ScaffoldNCAI00000000SAMN06622455
20-64-5
GCA_002255485.1ScaffoldNCAN00000000SAMN06622450
20-64-9
GCA_002257445.1ScaffoldNCCG00000000SAMN06622404
12-47-6
GCA_002256965.1ScaffoldNCGV00000000SAMN06622285
16-46-22
GCA_002282065.1ScaffoldNCIN00000000SAMN06622241
17-46-47
GCA_002257245.1ScaffoldNCHG00000000SAMN06622274
24-47-4
GCA_002280415.1ScaffoldNCDX00000000SAMN06622361
32-46-8
GCA_002282575.1ScaffoldNCJU00000000SAMN06622208
34-46-19
GCA_002281095.1ScaffoldNCFI00000000SAMN06622324
35-46-9
GCA_002282215.1ScaffoldNCIY00000000SAMN06622230
39-47-5
GCA_002279765.1ScaffoldNCCR00000000SAMN06622393
12-59-8
GCA_002255805.1ScaffoldNCAX00000000SAMN06622440
21-51-4
GCA_002280095.1ScaffoldNCDH00000000SAMN06622377
32-60-5
GCA_002257305.1ScaffoldNCHX00000000SAMN06622257
17-67-6
GCA_002281045.1ScaffoldNCFF00000000SAMN06622327
35-67-6
GCA_002257385.1ContigNCKM00000000SAMN06622190
13-68-4
GCA_002282695.1ContigNCKH00000000SAMN06622195
14-68-21
GCA_002279065.1ContigNCKB00000000SAMN06622201
15-68-25
SRA Data Details
ParameterValue
Data volume, Gbases49
Data volume, Mbytes23988

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