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Accession: PRJNA313213 ID: 313213

Xenopus laevis strain:J (African clawed frog)

Xenopus laevis strain:J Genome sequencing

See Genome Information for Xenopus laevis
Sequence and annotate the genome of the allotetraploid frog, Xenopus laevis.
AccessionPRJNA313213
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismXenopus laevis[Taxonomy ID: 8355]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus; Xenopus laevis
Publications (total 3)
  • Session AM et al., "Genome evolution in the allotetraploid frog Xenopus laevis.", Nature, 2016 Oct 20;538(7625):336-343
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Grants
  • "A genome assembly for Xenopus laevis" (Grant ID R01 HD065705, NIH Eunice Kennedy Shriver National Institute of Child Health and Human Development)
  • "Systematic improvement of Xenopus gene annotations and reference genomes" (Grant ID R01 HD080708, NIH Eunice Kennedy Shriver National Institute of Child Health and Human Development)
SubmissionRegistration date: 14-Jun-2016
International Xenopus Sequencing Consortium
- UC Berkeley
RelevanceModel Organism
Locus Tag PrefixXELAEV
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)511762
WGS master1
Genomic DNA403729
SRA Experiments9
Protein Sequences47732
Publications
PubMed4
PMC3
Other datasets
BioSample1
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases304
Data volume, Tbytes0.20
Related RefSeq Project
PRJNA338693 : Xenopus laevis strain:J RefSeq Genome sequencing and assembly

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