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Accession: PRJNA659065 ID: 659065

RNA-Seq analysis of wild-type and ttpA-C240ins mutant D. discoideum amebae during short-term nutrient deprivation

See Genome Information for Dictyostelium discoideum
In many eukaryotes, mRNAs containing specific AU-rich motifs are regulated by proteins of the tristetraprolin (TTP) family, which bind to these motifs through a tandem zinc finger (TZF) domain. More...
AccessionPRJNA659065; GEO: GSE156811
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismDictyostelium discoideum[Taxonomy ID: 44689]
Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium; Dictyostelium discoideum
PublicationsBai W et al., "A post-transcriptional regulon controlled by TtpA, the single tristetraprolin family member expressed in Dictyostelium discoideum.", Nucleic Acids Res, 2021 Nov 18;49(20):11920-11937
SubmissionRegistration date: 24-Aug-2020
LST, NIEHS
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments35
Publications
PubMed1
PMC1
Other datasets
BioSample35
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes4
SRA Data Details
ParameterValue
Data volume, Gbases361
Data volume, Tbytes0.15

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