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Accession: PRJNA50617 ID: 50617

Mouse ENCODE project (house mouse)

The mouse ENCODE (ENCyclopedia Of DNA Elements) Project.

See Genome Information for Mus musculus
The Mouse ENCODE project is a two-year effort, supported with ARRA funds, to discover and use relationships between mouse and human regulatory sequences to advance the ENCODE Project in its effort to map all functional elements in the human genome. The Mouse ENCODE project seeks to study cell types, tissues, and experimental conditions that cannot be addressed in human, to yield a broader compendium of functional genomic elements. By harnessing comparative genomics analyses and techniques, the Mouse ENCODE project aims to uncover principles and solve problems that are proving difficult by studying the human genome alone.
AccessionPRJNA50617
TypeUmbrella project (Subtype:Single organism discovery)
OrganismMus musculus[Taxonomy ID: 10090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
SubmissionRegistration date: 20-Jul-2010
The ENCODE Consortium
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments3470
Other datasets
BioSample1523
GEO DataSets1379
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes8470873
SRA Data Details
ParameterValue
Data volume, Gbases37,546
Data volume, Tbytes23.39
Mouse ENCODE project encompasses the following 3 sub-projects:
Project TypeNumber of Projects
Epigenomics1
BioProject
accession
OrganismTitle
PRJNA63471Mus musculusMouse ENCODE epigenomic data (The ENCODE Consortium)
Other1
BioProject
accession
OrganismTitle
PRJNA63475Mus musculusMouse ENCODE functional genomics data (The ENCODE Consortium)
Transcriptome or Gene expression1
BioProject
accession
OrganismTitle
PRJNA66167Mus musculusMouse ENCODE transcriptome data (The ENCODE Consortium)

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    Mouse ENCODE project
    The mouse ENCODE (ENCyclopedia Of DNA Elements) Project.
    BioProject

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