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ASM438072v1

Organism name:
Escherichia coli (E. coli)
Infraspecific name:
Strain: HvH-Ec77
BioSample:
SAMN06011361
BioProject:
PRJNA353170
Submitter:
Hvidovre Hospital - University of Copenhagen
Date:
2019/03/26
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_004380725.1 (latest)
RefSeq assembly accession:
GCF_004380725.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
MTXX01
Assembly method:
SPAdes v. 3.5.0
Expected final version:
yes
Genome coverage:
53x
Sequencing technology:
Illumina

IDs: 2361091 [UID] 8799398 [GenBank] 8957848 [RefSeq]

See Genome Information for Escherichia coli

There are 20302 assemblies for this organism

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History (Show revision history)

Comment

Bacteria and source DNA available from Kristian Schonning.

Global statistics

Total sequence length4,930,692
Total ungapped length4,930,258
Gaps between scaffolds0
Number of scaffolds56
Scaffold N50440,837
Scaffold L504
Number of contigs57
Contig N50440,837
Contig L504
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)56

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced4,930,692564,930,258440,83710
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