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ASM438065v1

Organism name:
Escherichia coli (E. coli)
Infraspecific name:
Strain: E23
BioSample:
SAMN06011358
BioProject:
PRJNA353170
Submitter:
Hvidovre Hospital - University of Copenhagen
Date:
2019/03/26
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_004380655.1 (latest)
RefSeq assembly accession:
GCF_004380655.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
MTXU01
Assembly method:
SPAdes v. 3.5.0
Expected final version:
yes
Genome coverage:
59x
Sequencing technology:
Illumina

IDs: 2361081 [UID] 8799358 [GenBank] 8954288 [RefSeq]

See Genome Information for Escherichia coli

There are 20302 assemblies for this organism

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History (Show revision history)

Comment

Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/genome/annotation_prok/

Global statistics

Total sequence length5,213,033
Total ungapped length5,212,710
Gaps between scaffolds0
Number of scaffolds132
Scaffold N50100,149
Scaffold L5016
Number of contigs133
Contig N50100,149
Contig L5016
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)132

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,213,0331325,212,710100,14910
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