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ASM438023v1

Organism name:
Escherichia coli (E. coli)
Infraspecific name:
Strain: 2698-1
BioSample:
SAMN06011338
BioProject:
PRJNA353170
Submitter:
Hvidovre Hospital - University of Copenhagen
Date:
2019/03/26
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_004380235.1 (latest)
RefSeq assembly accession:
GCF_004380235.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
MTXA01
Assembly method:
SPAdes v. 3.5.0
Expected final version:
yes
Genome coverage:
66x
Sequencing technology:
Illumina

IDs: 2360861 [UID] 8798938 [GenBank] 8951628 [RefSeq]

See Genome Information for Escherichia coli

There are 20302 assemblies for this organism

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History (Show revision history)

Comment

Bacteria and source DNA available from Kristian Schonning.

Global statistics

Total sequence length5,032,526
Total ungapped length5,031,404
Gaps between scaffolds0
Number of scaffolds144
Scaffold N50116,029
Scaffold L5014
Number of contigs147
Contig N5096,225
Contig L5014
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)144

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,032,5261445,031,404116,02930
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