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ASM438017v1

Organism name:
Escherichia coli (E. coli)
Infraspecific name:
Strain: 1276-1
BioSample:
SAMN06011336
BioProject:
PRJNA353170
Submitter:
Hvidovre Hospital - University of Copenhagen
Date:
2019/03/26
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_004380175.1 (latest)
RefSeq assembly accession:
GCF_004380175.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
MTWY01
Assembly method:
SPAdes v. 3.5.0
Expected final version:
yes
Genome coverage:
25x
Sequencing technology:
Illumina

IDs: 2360831 [UID] 8798878 [GenBank] 8953378 [RefSeq]

See Genome Information for Escherichia coli

There are 20301 assemblies for this organism

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History (Show revision history)

Comment

Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/genome/annotation_prok/

Global statistics

Total sequence length5,030,699
Total ungapped length5,029,262
Gaps between scaffolds0
Number of scaffolds110
Scaffold N50181,315
Scaffold L5010
Number of contigs113
Contig N50181,315
Contig L5010
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)110

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,030,6991105,029,262181,31530
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