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ASM438014v1

Organism name:
Escherichia coli (E. coli)
Infraspecific name:
Strain: 823-1
BioSample:
SAMN06011334
BioProject:
PRJNA353170
Submitter:
Hvidovre Hospital - University of Copenhagen
Date:
2019/03/26
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_004380145.1 (latest)
RefSeq assembly accession:
GCF_004380145.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
MTWW01
Assembly method:
SPAdes v. 3.5.0
Expected final version:
yes
Genome coverage:
31x
Sequencing technology:
Illumina

IDs: 2360841 [UID] 8798858 [GenBank] 8951768 [RefSeq]

See Genome Information for Escherichia coli

There are 20212 assemblies for this organism

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History (Show revision history)

Comment

Bacteria and source DNA available from Kristian Schonning.

Global statistics

Total sequence length5,235,528
Total ungapped length5,234,170
Gaps between scaffolds0
Number of scaffolds141
Scaffold N50161,335
Scaffold L5012
Number of contigs144
Contig N50161,335
Contig L5012
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)141

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced5,235,5281415,234,170161,33530
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