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Pap_ma_1.0

Organism name:
Papilio machaon (common yellow swallowtail)
Isolate:
ya'a_city_454_Pm
Sex:
male
BioSample:
SAMN03290678
BioProject:
PRJNA270386
Submitter:
BGI
Date:
2015/09/28
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001298355.1 (latest)
RefSeq assembly accession:
GCF_001298355.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT (in non-nuclear assembly-unit)
  • Data displayed for RefSeq version
WGS Project:
LADJ01
Assembly method:
Newbler v. 2.3
Expected final version:
no
Genome coverage:
10.0x
Sequencing technology:
454; Illumina HiSeq

IDs: 490331 [UID] 2349558 [GenBank] 2535398 [RefSeq]

See Genome Information for Papilio machaon

History (Show revision history)

Global statistics

Total sequence length278,436,446
Total ungapped length266,027,195
Gaps between scaffolds0
Number of scaffolds63,187
Scaffold N501,174,287
Scaffold L5056
Number of contigs68,691
Contig N5092,238
Contig L50669
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)68,691

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced278,421,26163,186266,012,0101,174,2875,5040
MoleculeTotal
Length
Mitochondrion MT15,185
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