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Taxonomy browser (Lentinula edodes)

Lentinula edodes

Taxonomy ID: 5353 (for references in articles please use NCBI:txid5353)
current name
Lentinula edodes
homotypic synonym:
Lentinus edodes
Genbank common name: shiitake mushroom
NCBI BLAST name: basidiomycetes
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 4 (Mold Mitochondrial; Protozoan Mitochondrial; Coelenterate Mitochondrial; Mycoplasma; Spiroplasma)
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Omphalotaceae; Lentinula
   Entrez records   
Database name Subtree links Direct links
Nucleotide 30,587 29,753
Protein 36,889 36,889
Structure 7 7
Genome 1 1
Popset 53 53
GEO Datasets 16 16
PubMed Central 1,670 1,670
Gene 49 49
SRA Experiments 650 650
Identical Protein Groups 34,461 34,461
Bio Project 52 47
Bio Sample 630 628
Assembly 9 7
Probe 2 2
Taxonomy 4 1

Genome Information

Go to NCBI genomic BLAST page for Lentinula edodes

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
dryaddb supplemental materials Dryad Digital Repository
Lentinula edodes (Berk.) Pegler 1976 taxonomy/phylogenetic Encyclopedia of life
5 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
2 records from this provider culture/stock collections Global Catalogue of Microorganisms
2 records from this provider taxonomy/phylogenetic Index Fungorum
2 records from this provider taxonomy/phylogenetic MycoBank
2 records from this provider taxonomy/phylogenetic Systematic Mycology and Microbiology Laboratory, Fungal Databases
Lentinula edodes taxonomy/phylogenetic TreeBase
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
5 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
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A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.

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