Conserved Protein Domain Family
DUF3530

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pfam12048: DUF3530 
Protein of unknown function (DUF3530)
This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Statistics
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PSSM-Id: 403313
Aligned: 18 rows
Threshold Bit Score: 224.646
Threshold Setting Gi: 81463644
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_015487812       18 ALFALLIAGACVSQQSYAAEAAASDTTTDAtnndstsdgetlPKEDETaatpasmrviPYPDANRHRSVLSYLSLyqrDN 97  Thalassoli...
mgcchina:PST_0733   5 PAFVLLLSVALGGSLPSVAQAQEPEAAEQT------------PADEPAsrp-----rpAPQTRGEALAAGLQRQL---ET 64  Pseudomona...
Q07XC7             36 QLLIVTISILLAAPSAKAQQP--------------------------------------------------YGHLp--AD 63  Shewanella...
BAJ00322            5 paLVISLFFLLTAPAAIAADPQDASPTETItqenmtqdkavfPGK--------------------------YDYLp--KE 56  Shewanella...
Q47VK3             29 LVLFICMLTFICSPLTFAEEQKTDASAENTqktankvtpikkP-----------------IELTQQYKEDLKHYLt--DE 89  Colwellia ...
Q15P56             29 ALGCMLLVPSMTSASTLTD---------------------------------------------------VQRQLf--PD 55  Pseudoalte...
Q21MS2             11 RALIITLCFSATSHLALAQEEDTAQQEQTKp----------kPPPPR-----------AVPDTNKQAERLLSEELg--ED 67  Saccharoph...
WP_015820797       13 skaplLLCLTWYSVVAIAQPATTPETTAPAe----------qPTPTPIps------arPVPDLEARTQQLIAQELs--KE 74  Terediniba...
jgi:Marme_1023      7 YLLISALSISALPSFVLAADDDATPETPTSskge---------------------yvkPTPQQTRIKGLILRLQPn-ySH 64  Marinomona...
WP_012068773        8 RHAIIALLSLSTNTALFAEESQAAPGSTTTpq--------qtTPVQTTptqnakeyiiPKPQASRIDALKASLTIrrlDH 79  Marinomona...
WP_015487812       98 EAVMLVAGERSFYGLYLPERNGKAQGGILILHDIDQHGQWPTLITPLREQLPDYGWNTLAIEMPMTPNpAIPsrs----- 172 Thalassoli...
mgcchina:PST_0733  65 AAQIELGGDDRFLALWQPANTAKPRGVVVIVPGEGETADWPRAVGPLRRGLAAHGWHTLSLTPDDPELsPGP-------- 136 Pseudomona...
Q07XC7             64 EIKFITIDGKQTEVLVRSWQSKKHFGSAMIIAASDTDADAAGLASYLRTNINARGWASISLTPAKGlyr----------p 133 Shewanella...
BAJ00322           57 EIIEITLGERKTEVLVRPWSGKKKLGSAILLANLGMGADGAGFQAYLRRQLNPAGWATISLTPPNKvlt----------p 126 Shewanella...
Q47VK3             90 QVKPLLAGPDDYLTLVKRYTSANGKGVVILLPEWQQGATNPKAINYLRNALPAKGWSTIAIQPSNK-------------- 155 Colwellia ...
Q15P56             56 KAKILQANNKSTVIIESQNTTSNLNGVAILVGETGRPPSSQQNLAMLTQYLNDLGWVTMQITPPTIGFePDLtdekttap 135 Pseudoalte...
Q21MS2             68 AIVWLNAAGEKFISLWEPDRSGNPFGAILIVHGEGQTADWPYTIRALRQSLPDHGWSTLSISLPNPAEtPPP-------- 139 Saccharoph...
WP_015820797       75 EVVWLEGGADKFPAVWKADTSGDPFGAILLIHGAGQTLDWPSSLHELRNSLTDFGWSTLSISLPQPDLpPAPpr------ 148 Terediniba...
jgi:Marme_1023     65 EIETIDDGTEDFLGLFNESGTGDPQGCVLFLHEDHAHPDWPQVISPLRRNLPSHSWCTLSIEVPDIAGrATP-------- 136 Marinomona...
WP_012068773       80 QIQTLEANGEPFLALYRLSLTSSTQGCIIMLHSDNEHPDWPDAIAPLRDAMPEHSWCTISIEVPDIIKrAEP-------- 151 Marinomona...
WP_015487812      173 eySATSSETTAVVEDENSDAGASESPATSATDTtanpqikpdpidsagisksdeldttpqdlaaennaplprlerlpalp 252 Thalassoli...
mgcchina:PST_0733 137 --RLPPPEPSAAADKPTGDSDSETEQPAAPPDSagylpeqtapads---------------------------------- 180 Pseudomona...
Q07XC7            134 nyATKPEEVTKAGTEQLQLTSNKSTPKYESSQL----------------------------------------------- 166 Shewanella...
BAJ00322          127 nfATSPEEIAKAGEMKQAQKSTEMTEQYADDVW----------------------------------------------- 159 Shewanella...
Q47VK3            156 -------------PENYPSTEITVAEQKKENQL----------------------------------------------- 175 Colwellia ...
Q15P56            136 dsQSQASTTDESQDNTANDETEAAQETPTPANSspaspqyq--------------------------------------- 176 Pseudoalte...
Q21MS2            140 -------------ARPSGDTTPPSKPTPPPTEP----------------------------------------------- 159 Saccharoph...
WP_015820797      149 -pSALPAENPTPTDGIATNDDDATTPELSPE------------------------------------------------- 178 Terediniba...
jgi:Marme_1023    137 ----------TTVPSNDSDSDSDNSSPTPPTDGg---------------------------------------------- 160 Marinomona...
WP_012068773      152 ------------VKITTATAENTSSPKELPNQT----------------------------------------------- 172 Marinomona...
WP_015487812      253 qsatpveddvttepsADDRYRQQVREQIQAGINFLNQRGQL---NIVVIASGESAPWAADYVQQqq-------------- 315 Thalassoli...
mgcchina:PST_0733 181 ---depdataaeqdaPRPSHAERMQARLAAAIEHARTLQAP---TITLLGHGTGAYWAARYLAQ---------------- 238 Pseudomona...
Q07XC7            167 -----------------LELRNFQQSNLNEALNQLTSTTSLfpgGKILIVIDDTAGMVTNLLYD---------------- 213 Shewanella...
BAJ00322          160 -----------------KKIREKQSQFLSQAIDQLDAIGAPypgKRLLITSGQGAGLVITMLSN---------------- 206 Shewanella...
Q47VK3            176 ---------------VLKEYKSKLNSMLNAVMNTAREyp----gIVLVIAQGNNAALLVDIYSQ---------------- 220 Colwellia ...
Q15P56            177 --------lhqisngHFLQHEQELRGLMQAAMARAQSys----gFRLIIAQGTSAAWLIKIYAE---------------- 228 Pseudoalte...
Q21MS2            160 ----------------------IVIERMKAAMSYLNKRGQY---NIVILAHGVGASRSVQYLSQlstsrpnnlpsggrsr 214 Saccharoph...
WP_015820797      179 -----------------------ITARLQAAVAYLNSRGQY---NLAIAGEDVGALWATQYVARlardfagskknrprgk 232 Terediniba...
jgi:Marme_1023    161 ---------------VTLTNEQKVFDRIDAALALIREKGYQ---NAAYLGHRSGAAYALKYVAD---------------- 206 Marinomona...
WP_012068773      173 ----------------------LVFARIQATMDYAKTQGIE---QFTFLGYGTGASYALGFLAA---------------- 211 Marinomona...
WP_015487812      316 -rdSNNAKGITLIMVDAREHRLS-------RIQLNQRLEGLDIPMLDLVTAD-NRETPFQLQQRAGAM--AHKHMRKYQQ 384 Thalassoli...
mgcchina:PST_0733 239 ---TPSKEIAQLVLIDPRAPAVA-------EKALDDDLAKLAVGIGDFHTGD-RPVAQRQAMQRRNAM--RRAGHPDYRQ 305 Pseudomona...
Q07XC7            214 ---KKIPTPDVLVIVNAYREFEYlidpqsqRKSIAEQLVTMSIPILDIQSADaHPNSIEQAPTRLNYN--QVKPAKYYRQ 288 Shewanella...
BAJ00322          207 ---NLLAKPDILVIINPYMKMKDe------NLGLAKQLAELDIPVLDIQSADgHRASYKTARLRAELS--PQNAPYRYSQ 275 Shewanella...
Q47VK3            221 ---DDSQQPNALIMLSSYRQSNHali-ngvNENFARQVASTELPILDLYLKHdNPLVLNKAAQRRAFS--KQEMKVYYRQ 294 Colwellia ...
Q15P56            229 ---KQIPSPDALVTISPFWPQRNl------NALIANYTAVTEMPLLDIYSPQdNNWSLMSATQRGIDA--SKNLKLDYRQ 297 Pseudoalte...
Q21MS2            215 ataIIDRPIRALIMVNARNGIEGa------DDNLTEYLTDRSLPVMDIFFGD-HVLDATEPDQRKMAA--KKNRIAHYHQ 285 Saccharoph...
WP_015820797      233 vnaKMSRPVRALILINARNSVPYqtg--vpEKNLSDWFNDPGLPILDVYFGS-HFLDEKEPAIRAKNA--RRKRLTDYVQ 307 Terediniba...
jgi:Marme_1023    207 ----RGIAGQALILVDIKTVPPAs------EYQLSQSIESLRIPVLDYYFDR-LPSDHRFAQWRQQASnkRRNSSDAFVQ 275 Marinomona...
WP_012068773      212 ----NKNAGKALTLIDIESPPNLs------DYEVAQQIRQIEQPILDYYVD--KTGNDQFAVWRKQAAnqRTDKVGDFIQ 279 Marinomona...
WP_015487812      385 IIL----PTSANNSDLATRRIRGWLKT 407 Thalassolituus oleivorans
mgcchina:PST_0733 306 VALpnleGDRYGDQEQLVRRVRGWLER 332 Pseudomonas stutzeri A1501
Q07XC7            289 YQMsldlSSPSGWEEAL-DQIEGFSRT 314 Shewanella frigidimarina NCIMB 400
BAJ00322          276 QTLvlnlNNPMSWETAL-KLIEGFALR 301 Shewanella violacea DSS12
Q47VK3            295 RQLnn-tVTGYYPEEELLSQINSWLKA 320 Colwellia psychrerythraea 34H
Q15P56            298 RQLtn-tFNTFSDSAFVSKEIYGWLHy 323 Pseudoalteromonas atlantica T6c
Q21MS2            286 SKLlepsANWQEGENRLTRRVRGFLNK 312 Saccharophagus degradans 2-40
WP_015820797      308 LQLidspIQSSGGETQLSRRVRGFLNK 334 Teredinibacter turnerae
jgi:Marme_1023    276 IDAlpdaRFGNSADKRLEQRVWGFLKQ 302 Marinomonas mediterranea MMB-1
WP_012068773      280 VNAlpdrVTGKNSKQLLIQRVRGFLKQ 306 Marinomonas sp. MWYL1
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