4GAT,3DFV,2KAE


Conserved Protein Domain Family
ZnF_GATA

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smart00401: ZnF_GATA 
Click on image for an interactive view with Cn3D
zinc finger binding to DNA consensus sequence [AT]GATA[AG]
Statistics
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PSSM-Id: 214648
View PSSM: smart00401
Aligned: 47 rows
Threshold Bit Score: 55.1167
Threshold Setting Gi: 6322203
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4GAT_A          7 NGPTTCTNC-F-TQTTPLWRRNPEGq---PLCNACGLFLKL---HGVv----RPLSLKTDVI 56   Emericella nidulans
O75046        262 LKGYACRHC-F-TTTSKDWHHGGREn--iLLCTDCRIHFKK---YGEl----PPIEKPVDPP 312  human
Q07928         67 GVTRRCPQCaV-IKTSPQWREGPDGe--vTLCNACGLFYRK---IFLvfgkdLAKRYFNEIK 122  Saccharomyces cerevisiae S288c
EGO55606      928 NMVRDCANC-H-TRNTPEWRRGPSGn--rDLCNSCGLRWAK---QTGr---vSPRTSSRGGN 979  Neurospora tetrasperma FGSC 2508
XP_002754379  385 GAGRACESC-Y-TTQSYQWYSWGPPnmqcRLCASCWTYWKK---YGGl---kMPTRLDGERP 438  white-tufted-ear marmoset
AAD27790      434 PSGRACHHC-Y-GAESKDWHHANGl----LLCTDCRLHYKK---YGQl---rQIANRPSQVP 483  nematode
EDZ71069      494 HTTRVCVSC-H-SSDSPCWRPSWSPrkqdQLCNSCGLRYKKt--HTRc---lNDLCRKIPTK 548  Saccharomyces cerevisiae AWRI1631
NP_012278      48 GITRTCGQC-GeIKTSLQWREGPNGa--aCLCNACGLFFRKlilRFGr---aAAKRYMEQIK 103  Saccharomyces cerevisiae S288c
EGO52130      455 AEEYVCTDC-G-TLDSPEWRKGPSGp--kTLCNACGLRWAK---KEKk---kNANNNNNGGG 506  Neurospora tetrasperma FGSC 2508
O94776        362 QKGLTCESC-H-TTQSAQWYAWGPPnmqcRLCASCWIYWKK---YGGl---kTPTQLEGATR 415  human
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