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SRX081847: Indexed sequencing of MTB and E.coli strains
1 ILLUMINA (Illumina HiSeq 2000) run: 2.5M spots, 524.2M bases, 335.6Mb downloads

UUID: 95358a59-30b6-4d6e-bc85-814f6d4e6eb3
Design: Illumina sequencing of Escherichia coli PBA1 via random selection
Submitted by: Broad Institute (BI)
Study: Bacterial/Fungal Persistence Gene Identification Multi-Isolate Project
PRJNA38649 • SRP001124 • All experiments • All runs
show Abstracthide Abstract
Persistence Comparative
Sample: Generic sample from Escherichia coli PBA1
SAMN00632088 • SRS213930 • All experiments • All runs
Organism: Escherichia coli PBA1
Library:
Name: Pond-67138
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Spot descriptor:
1  forward barcode
Group tagBasecalls
AACGCATT
110  reverse

Experiment attributes: (show all 10 attributes...) (hide...)
analysis_type: AssemblyWithReference
gssr_id: 100221.0
library_type: WholeGenomeShotgun
lsid: broadinstitute.org:bsp.prod.sample:1X2J5
material_type: DNA:DNA Somatic
primary_disease: Persistence Comparative: E.coli
project: G13306
root_sample_id: SM-1RKX6
sample_id: SM-1X2J5
work_request: 25407
Pipeline: show...hide...
NameStepProgramVersionNotes
base caller2011-07-06 20:10:10.0GAPipelineRTA1.12.4.1Sequencer Application 1.4.5
Runs: 1 run, 2.5M spots, 524.2M bases, 335.6Mb
Run# of Spots# of BasesSizePublished
SRR3146662,496,117524.2M335.6Mb2011-07-19

ID:
92578

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