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    commd5 COMM domain-containing protein 5 [ Dictyostelium discoideum AX4 ]

    Gene ID: 8619332, updated on 17-May-2024

    Summary

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    Gene symbol
    commd5
    Gene description
    COMM domain-containing protein 5
    Primary source
    dictyBase:DDB_G0274791
    Locus tag
    DDB_G0274791
    Gene type
    protein coding
    RNA name
    COMM domain-containing protein 5
    RefSeq status
    PROVISIONAL
    Organism
    Dictyostelium discoideum AX4 (strain: AX4)
    Lineage
    Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
    Old locus tag
    DDBDRAFT_0217475; DDBDRAFT_0266456; DDB_0217475; DDB_0266456
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    2
    Sequence:
    Chromosome: 2; NC_007088.5 (3853864..3854650, complement)

    Chromosome 2 - NC_007088.5Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene tRNA-Gln Neighboring gene hypothetical protein Neighboring gene peptidase C19 family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007088.5

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of Dictyostelium discoideum. Glöckner G, et al. Nature, 2002 Jul 4. PMID 12097910
    2. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by dictyBase

    Component Evidence Code Pubs
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Names
    COMM domain-containing protein 5

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007088.5 Reference assembly

      Range
      3853864..3854650 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_638813.1 → XP_643905.1  COMM domain-containing protein 5 [Dictyostelium discoideum AX4]

      See identical proteins and their annotated locations for XP_643905.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q556A5, Q86IW8
      Conserved Domains (1) summary
      cl06336
      Location:95 → 203
      Commd; COMM_Domain, a family of domains found at the C-terminus of HCarG, the copper metabolism gene MURR1 product, and related proteins. Presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in ...
    Nucleotide Protein
    Heading Accession and Version

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