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    Cbr-tbx-43 Protein CBR-TBX-43 [ Caenorhabditis briggsae ]

    Gene ID: 8584855, updated on 30-Nov-2023

    Summary

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    Gene symbol
    Cbr-tbx-43
    Gene description
    Protein CBR-TBX-43
    Locus tag
    CBG_15132
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Caenorhabditis briggsae (strain: AF16)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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    Genomic context

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    See Cbr-tbx-43 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    5
    Sequence:
    Chromosome: III; NC_013490.2 (710775..714573, complement)

    Chromosome III - NC_013490.2Genomic Context describing neighboring genes Neighboring gene Protein CBR-CLP-4 Neighboring gene Protein CBR-HLH-33 Neighboring gene Protein CBR-CNC-6 Neighboring gene tRNA Neighboring gene Protein CBG15130

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_013490.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics. Stein LD, et al. PLoS Biol, 2003 Nov. PMID 14624247, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell fate specification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Protein CBR-TBX-43
    XP_045095674.1
    • C. briggsae CBR-TBX-43 protein; contains similarity to Pfam domain PF00907 T-box contains similarity to Interpro domain IPR001699 (Transcription factor, T-box);
      Predicted

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013490.2 Reference assembly

      Range
      710775..714573 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045243336.1 → XP_045095674.1  Protein CBR-TBX-43 [Caenorhabditis briggsae]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A8XLE7
      Conserved Domains (1) summary
      pfam00907
      Location:8 → 186
      T-box
    Nucleotide Protein
    Heading Accession and Version

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