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    TTHERM_00219180 DEAD/DEAH-box helicase family protein [ Tetrahymena thermophila SB210 ]

    Gene ID: 7837694, updated on 28-Dec-2023

    Summary

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    Gene symbol
    TTHERM_00219180
    Gene description
    DEAD/DEAH-box helicase family protein
    Locus tag
    TTHERM_00219180
    Gene type
    protein coding
    RNA name
    DEAD/DEAH-box helicase family protein
    RefSeq status
    PROVISIONAL
    Organism
    Tetrahymena thermophila SB210 (strain: SB210)
    Lineage
    Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena
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    Genomic context

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    Exon count:
    7

    NW_002476335.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene bromodomain domain protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_002476335.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    DEAD/DEAH-box helicase family protein
    XP_001020590.3
    • encoded by transcript TTHERM_00219180A

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_002476335.1 Reference assembly

      Range
      511467..514618 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001020590.3 → XP_001020590.3  DEAD/DEAH-box helicase family protein [Tetrahymena thermophila SB210]

      See identical proteins and their annotated locations for XP_001020590.3

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      I7M8Z5
      Conserved Domains (4) summary
      smart00487
      Location:98 → 288
      DEXDc; DEAD-like helicases superfamily
      cd00268
      Location:85 → 289
      DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
      pfam00271
      Location:329 → 441
      Helicase_C; Helicase conserved C-terminal domain
      pfam13959
      Location:481 → 539
      DUF4217; Domain of unknown function (DUF4217)
    Nucleotide Protein
    Heading Accession and Version

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