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    4930583I09Rik RIKEN cDNA 4930583I09 gene [ Mus musculus (house mouse) ]

    Gene ID: 78057, updated on 8-Feb-2024

    Summary

    Official Symbol
    4930583I09Rikprovided by MGI
    Official Full Name
    RIKEN cDNA 4930583I09 geneprovided by MGI
    Primary source
    MGI:MGI:1925307
    See related
    Ensembl:ENSMUSG00000024088 AllianceGenome:MGI:1925307
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See 4930583I09Rik in Genome Data Viewer
    Location:
    17 E1.1; 17 34.32 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (65139519..65143066, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (64832524..64836071, complement)

    Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene mannosidase 2, alpha 1 Neighboring gene STARR-positive B cell enhancer mm9_chr17:65017795-65018096 Neighboring gene STARR-positive B cell enhancer ABC_E11649 Neighboring gene STARR-positive B cell enhancer ABC_E2498 Neighboring gene STARR-seq mESC enhancer starr_42996 Neighboring gene down-regulated in hepatocellular carcinoma Neighboring gene STARR-seq mESC enhancer starr_42997 Neighboring gene STARR-seq mESC enhancer starr_42998 Neighboring gene predicted gene 4701 Neighboring gene STARR-seq mESC enhancer starr_42999 Neighboring gene predicted gene, 25344

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    uncharacterized protein LOC78057

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_030031.1NP_084307.1  uncharacterized protein LOC78057

      Status: VALIDATED

      Source sequence(s)
      BY715987
      Consensus CDS
      CCDS84328.1
      UniProtKB/TrEMBL
      Q9D2E3
      Related
      ENSMUSP00000024896.4, ENSMUST00000024896.4

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000083.7 Reference GRCm39 C57BL/6J

      Range
      65139519..65143066 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)