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    TRIADDRAFT_60973 uncharacterized protein [ Trichoplax adhaerens ]

    Gene ID: 6758207, updated on 17-Feb-2024

    Summary

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    Gene symbol
    TRIADDRAFT_60973
    Gene description
    uncharacterized protein
    Locus tag
    TRIADDRAFT_60973
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trichoplax adhaerens (strain: Grell-BS-1999)
    Lineage
    Eukaryota; Metazoa; Placozoa; Uniplacotomia; Trichoplacea; Trichoplacidae; Trichoplax
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    Genomic context

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    See TRIADDRAFT_60973 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    21

    NW_002060961.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_002060961.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Trichoplax genome and the nature of placozoans. Srivastava M, et al. Nature, 2008 Aug 21. PMID 18719581

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables histone acetyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of histone acetyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription regulator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_002116995.1
    • similar to LOC495689 protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_002060961.1 Reference assembly

      Range
      400205..406712 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002116959.1 → XP_002116995.1  uncharacterized protein TRIADDRAFT_60973 [Trichoplax adhaerens]

      See identical proteins and their annotated locations for XP_002116995.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B3S9N8
      Conserved Domains (9) summary
      cd02337
      Location:722 → 762
      ZZ_CBP; Zinc finger, ZZ type. Zinc finger present in CBP/p300 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. CREB-binding protein (CBP) is a large multidomain protein that ...
      pfam09606
      Location:911 → 1399
      Med15; ARC105 or Med15 subunit of Mediator complex non-fungal
      cd15802
      Location:265 → 343
      RING_CBP-p300; atypical RING domain found in CREB-binding protein and p300 histone acetyltransferases
      cd15557
      Location:345 → 376
      PHD_CBP_p300; PHD finger found in CREB-binding protein (CBP) and histone acetyltransferase p300
      pfam02172
      Location:1 → 63
      KIX; KIX domain
      pfam03153
      Location:1338 → 1510
      TFIIA; Transcription factor IIA, alpha/beta subunit
      cl02120
      Location:407 → 666
      HAT_KAT11; Histone acetylation protein
      cl02556
      Location:148 → 253
      Bromodomain; Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
      cl02660
      Location:781 → 856
      zf-TAZ; TAZ zinc finger
    Nucleotide Protein
    Heading Accession and Version

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